Tag | Content |
---|
EnhancerAtlas ID | HS184-18057 |
Organism | Homo sapiens |
Tissue/cell | T47D |
Coordinate | chr20:33906900-33907950 |
SNPs | Number: 2 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
LMX1B | MA0703.2 | chr20:33907056-33907067 | TTAATTAAATT | - | 6.32 |
|
| Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
SE_02275 | chr20:33905091-33909712 | Astrocytes | SE_26824 | chr20:33905238-33907989 | Esophagus | SE_28226 | chr20:33904907-33909177 | Fetal_Intestine | SE_29043 | chr20:33904883-33909293 | Fetal_Intestine_Large | SE_36174 | chr20:33905204-33909057 | HMEC | SE_39170 | chr20:33905039-33909136 | IMR90 | SE_44275 | chr20:33905060-33909528 | NHDF-Ad | SE_44962 | chr20:33905127-33909221 | NHLF | SE_45807 | chr20:33904873-33909959 | Osteoblasts | SE_51781 | chr20:33905671-33909330 | Skeletal_Muscle_Myoblast | SE_55706 | chr20:33904888-33910416 | u87 | SE_63567 | chr20:33905657-33909435 | HSMM | SE_64842 | chr20:33905143-33908040 | NHEK | SE_67595 | chr20:33904888-33910416 | u87 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr20 | 33907005 | 33907177 | chr20 | 33906912 | 33907531 | chr20 | 33907745 | 33907913 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I035317 | chr20 | 33904992 | 33910110 |
|
Enhancer Sequence | AGTTACTCAT ATTTTCCCAT TTATTTAAGC CATTAAAATT CATGCAGATA TTTTATAAGC 60 CACCAGGATT CAGTGACTGG TATTACTGAA TGTTTAATAA TAAACTAAAC AGAAGAAATC 120 AGAGGGTTAA ATGATGACTG CAATTCCTGT AATGACTTAA TTAAATTTTT ATTGAGTACA 180 TAAACTATGA TGTCACCTCT AGCCAACCAC AGGCCTGCTT TCCCAGCATG TCACAGGGAG 240 GGAGCACTCA ATAGGAGGCT TGGCTAAATG AGCAGCAGGT CTCAGCTGAA ATGGGGAGGG 300 GAGTGAGGCT CATGTAACAC ACTCAATAAA TTATCCGTTC ATTTTTAAAC AAAGTCCATG 360 AGTTATAATA TATTTGCCAT GCACTTTTTA TGACATAATA AAAATGTTAC CTTAAGGATT 420 ACTTAACACA TACTACAAAT ATTATAGCAG AGGCAGGCAC AAGGGGCAAA GAAAACAAAC 480 ACGAGCAGGC CAGGGACGGG TCCTGGAGTT TATGTCCCAG GGGAAACAGC ATAGTATATT 540 AAAAAGGGAA TGCAAAAAAA AGGAAGGGAT GCAAGAGTTC AGGGTTACTA ATCGGCAGAT 600 TAATGAATGA GACAACCAAC AGAGAACACA AGTAAGGCAA TAATGAATCT TGCAGGGCAC 660 ATGTTTAATT AAAGTAGCAT TCTCAAGGAG GAATATTAGC TTTAAAGAGA TGCCAGTTCA 720 TTTGAGGCCA ATTCGCTGCT CTCTTTCCCC TTTTCACTGT TGCTGCCTTA AAGATATTTA 780 TGTGACTGCT TAACAGAGGA ACCAGACTAT GTGGATACAG GGACTGATGG GAGATCAAGT 840 TTTAACTCCT CCATGGACTC TACAAGGCTT CTAGTGATCT GCTCTTGGCC ATCTTTTTTG 900 CCTCCCCTCC TCTTGCCTCC CCATCTTACT TCACCCTGCA GTCAGTAAAG TATGTGCACA 960 GATACATCAT GCTGTCATCT ATTTCTTAGT CATACTGCTG CCAGGAATTC TTCTCTTCTT 1020 TATCCACTGA TGGAAGGGAT GCTAACTCCT 1050
|