| Tag | Content |
|---|
EnhancerAtlas ID | HS184-13535 |
Organism | Homo sapiens |
Tissue/cell | T47D |
Coordinate | chr17:39956800-39958200 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr17:39958002-39958021 | TCCCGCCCCCTGGTGGCAG | - | 7.48 | | Foxa2 | MA0047.2 | chr17:39957853-39957865 | ACAAAGTAAACA | - | 6.18 | | KLF5 | MA0599.1 | chr17:39957111-39957121 | GGGGCGGGGC | - | 6.02 | | PLAG1 | MA0163.1 | chr17:39957529-39957543 | CCCCCTTTGCCCCC | - | 7.08 |
|
| | Number of super-enhancer constituents: 16 | ID | Coordinate | Tissue/cell |
| SE_23177 | chr17:39956502-39958045 | Colon_Crypt_1 | | SE_23845 | chr17:39956729-39957859 | Colon_Crypt_2 | | SE_24826 | chr17:39956827-39958000 | Colon_Crypt_3 | | SE_26576 | chr17:39954386-39958196 | Esophagus | | SE_27684 | chr17:39956419-39958391 | Fetal_Intestine | | SE_28604 | chr17:39955674-39958500 | Fetal_Intestine_Large | | SE_31640 | chr17:39956832-39958057 | Gastric | | SE_35990 | chr17:39955060-39958415 | HMEC | | SE_42558 | chr17:39956871-39958008 | Lung | | SE_50269 | chr17:39956747-39958247 | Sigmoid_Colon | | SE_52578 | chr17:39956556-39958197 | Small_Intestine | | SE_56909 | chr17:39956774-39958493 | VACO_400 | | SE_57643 | chr17:39957047-39957920 | VACO_503 | | SE_58007 | chr17:39956803-39957082 | VACO_9m | | SE_58007 | chr17:39957161-39957981 | VACO_9m | | SE_64699 | chr17:39955625-39958048 | NHEK |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr17 | 39956975 | 39957353 | | chr17 | 39956892 | 39957997 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I041798 | chr17 | 39955016 | 39958490 |
|
Enhancer Sequence | GCGACAGAGC AAGACTCTGT CTCAAAAAAA AAAAAAGAAA AGAAAAAAAA AAACCACATT 60
CATGCATGCA CGCAGGCAGG CACACATTCA CACCCAGACC CGCACATTCA CGCAACACAC 120
AAGCACACGG GCACTTTCAG ACCCACACCC AGCCGTCCAG ATTCCAAAGC TTGTGCTCAT 180
GGCAGGTTCA CGTCTGCGCA GACACGCCAC AGCACATCCC GCTCCCCACC CTCTGAAGGG 240
CCAGCCCCTC CCAGAAACAG GGGCTGGGCC TTGGTGGACC TGACAACACT GCAGCTTGAA 300
AGAGGTGGGG TGGGGCGGGG CCACCCTGCA CCTGGAGGCG GTCAGGAAAC GCTACCACTG 360
CAGATGTGCT TCCCCGGAAG ACCCACCTAT GGGAGGAAGG AGTGAGGTCA CTGAGCCCCC 420
AGCCTTGACC CAGCCCTTTT TCCAGACTCA GACTCTGCCC TTTCAGCTCT CATCCCGATC 480
AAAGGCCTAG GGGAGGGGCT TGGAGTGGGA CAGGGAGTCC TCCTAGGAAC AGAGGTGGAC 540
AGGGCCCAGG CCAGATCACC TGGCACATCT GGAGAGAAAG TAGGGGTGGG GCAGTGAGAA 600
CTTGGCTTCC CAGCCTTGAC TCTACCTTCA AGTGGGAAGA CAACTCTGCC GCCCTGCCCC 660
CGGGAGGCTG GAAATATGGG GCAGAACTGT CACCTGGCTG GCCTTGGCCC TGGGTTCCTC 720
CCAGACAGAC CCCCTTTGCC CCCACCTCCC TGCTGTGGAA TAGGGGTGGG GTTTGGCGGT 780
GAGTCCCAGG CTAGGAGGTA GCCACCAGGC ACCATCGTTG CCTGCACACC CTGCACACCG 840
GGACCCACTG CCCCTGGGAG CCCATGTAAA ATCGGTCAAG AGGGATCTGG CTGTCCCACT 900
GCACCCCAAG AATCCCAAAG TAATCAAACC ACATCCCTGG GGCTCCTCTG CCTGCTAAGC 960
TGGGGCCCCA ACCCGGCTCT GGAATGTGGG AATAGAGGGC AGCGGCAGGG CCAGCTCCCT 1020
CTGACTCTAA GGAAACTGGG TCAGTAAATG CCCACAAAGT AAACACTAGG AGCAAATGTC 1080
CTTGGCCCCC TCCCACACTT GCCACATTCC CCGAGGGAAG TGATCCTGAA CTAGGAAAAT 1140
ACAGGACTTC CCATCTTAGA AATCTGAAAC CATCGTCTTC CCGCCTGGGG AGGACTGTGT 1200
TCTCCCGCCC CCTGGTGGCA GATCTGCACA CTGCGTCCTC TCTCACACAT CCTTCAGCCC 1260
CAGGTGCAGA GGACCAGCCA GGGCCCAGAT GGTGCCCCTC CGCCCCACAT TTTACAGATG 1320
AGGGGACACA GGTGCGGAGA GAGGGAGGGA AGGACCTGTA CCCTTACAAC TGAGCTCCAG 1380
GGAGACGACC ACGGGTACTA 1400
|
