| Tag | Content |
|---|
EnhancerAtlas ID | HS184-13242 |
Organism | Homo sapiens |
Tissue/cell | T47D |
Coordinate | chr17:27906980-27907870 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr17:27907499-27907518 | TGGCCACCAGGTGGCACCA | + | 9.7 | | IRF1 | MA0050.2 | chr17:27907778-27907799 | CTTCTGTTTCTTTTTCTTTTT | + | 6.6 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_03576 | chr17:27906928-27907885 | Brain_Angular_Gyrus | | SE_04273 | chr17:27904200-27907921 | Brain_Anterior_Caudate | | SE_05259 | chr17:27903394-27916333 | Brain_Cingulate_Gyrus | | SE_06486 | chr17:27903728-27916430 | Brain_Hippocampus_Middle | | SE_08195 | chr17:27903857-27916430 | Brain_Inferior_Temporal_Lobe | | SE_08898 | chr17:27907046-27907217 | Brain_Mid_Frontal_Lobe | | SE_08898 | chr17:27907253-27907436 | Brain_Mid_Frontal_Lobe | | SE_08898 | chr17:27907600-27907798 | Brain_Mid_Frontal_Lobe |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I029579 | chr17 | 27906961 | 27909521 |
|
Enhancer Sequence | AGCTCGTCTC TATCCCAGTC TTGCTTGTAG GGTTCCCTGC CTCCCATGCT GTGCTCCAGC 60
CCGGGGGCTG CCTCCATTCC CATGCAGCAT TTCTACCCTC CATGCCTCTG CCTCTCTTGC 120
TGCACTCCCC CATGAGGACT AGAATCACCT GGCTAGGCTG CCTCCCCAGC TAGATTGTGA 180
GCTCCTTAAG GGCAGGGATT GTGTCTCAGC TGCCTCTGTG CTCCCAGTGC CAAGAGCAGT 240
AGCTGGCTCC GGGAAGGTGC TCAGTTAATG TGCTGTTGAA TGGAGCCCAT ATTTGGGTGT 300
ATTTACCATA CACATGCACG CATGCACACA CAACCCAGGT AGAATCAGAC CATAGAAGTA 360
GGAGCCTTGG GGTCTGGAAG AGGTCTGGGT TTAGGATCTG AGTCGCCCAG GCCTGGTTAT 420
GCCCATCTGC CCACACAGGC CCTTGGGGAG GAGAGCACCT CCTCTCTCCA GATCCAGGCC 480
AGCAGGCACA GCCTGGCATG AGGACATGGC CATCAGAGGT GGCCACCAGG TGGCACCAGC 540
ATCCATCTTA TGTGCTGGGT GAGTGGCAGG GGGTGTCCCA CACTGCCTCT CAGACGGAAG 600
CAGAAACACC TCATTCAACC AGCCTCAGCG CACGTGCCTA ATTCTGAGCA CGCTAGAGGC 660
CTAGCCAGCA GTCACAAAGT TAGTCACATC CCTGAAGCCC ACCCATCTTT TCAGCGAAGA 720
GCAGAGGCTT CTCTAAAGAC AGTGGGGTCG GTGCCACTGG GACAGAACCC AGTGGCCCAC 780
CCTCCCAGCC GGAGGTAGCT TCTGTTTCTT TTTCTTTTTT TTTTTTTTGA GACGGAGTTT 840
GGAGTTTTGC TCTTGTTGCT CAGGCTGGAG TGCAATGGCG TGCTCTCGGC 890
|
