EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS184-08684

Organism

Homo sapiens

Tissue/cell

T47D

Coordinate

chr12:120763180-120763660

Target genes

Number: 18
Name	Ensembl ID

PXN	ENSG00000089159
NME2P1	ENSG00000123009
RNU4	ENSG00000202538
SIRT4	ENSG00000089163
U6	ENSG00000252659
PLA2G1B	ENSG00000170890
MSI1	ENSG00000135097
RPS27P25	ENSG00000239881
TRIAP1	ENSG00000170855
GATC	ENSG00000257218
RPL31P52	ENSG00000219355
SRSF9	ENSG00000111786
DYNLL1	ENSG00000088986
RP11	ENSG00000248008
Y	ENSG00000222601
RPL29P24	ENSG00000241030
RNF10	ENSG00000022840
COQ5	ENSG00000110871

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr12:120763425-120763444	CTGCCACTGGAGGGCAGCA	+	6
Zfx	MA0146.2	chr12:120763246-120763260	CCCGCCTCGGCCTC	+	6.01

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_48023	chr12:120763467-120763966	Pancreas
SE_65438	chr12:120763058-120764375	Pancreatic_islets

Enhancer Sequence

TTAGTAGAGA CAGGGTTTCA CCATGTTGGC CAGGCTGGTC TCGAACTCCT GACCTCAAGT 60
GATCCGCCCG CCTCGGCCTC CCAAAGTGCT GGGATTACAG GCATGAGCCA CCGCGCCTGG 120
CCTGAAAGCG ATTTTTAACA TGGTTGCAAG AATACAGTAA AATCCTGTAT TCAGAAGGTG 180
CAGTGACAAC CACTGCTAGA AAATGACACG TGGATAGTTG CTGTGATGTT TACTGTTGCT 240
ACATTCTGCC ACTGGAGGGC AGCATCGCCC ACTGTTTTGC ACGTCGGTCA TTGTTTCCAT 300
CTCTAACGGG GTGCGTTCGC TACAGGGTCC TCTTGGAACA TATTTGTTTA TTTGACAAGA 360
GGTGAAAATA TGTTATCCTT AGCAGATATG CAAGTCCCCT TTGTATGCCT CGTGAGATCC 420
TTGGCGTGTG CCCCACCCCG CCCCCGGCAG GCACTCCAAT TTTCCTGCAG GCGGATCACT 480