EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS184-07666

Organism

Homo sapiens

Tissue/cell

T47D

Coordinate

chr12:53467570-53468380

Target genes

Number: 18
Name	Ensembl ID

KRT18	ENSG00000111057
KRT8	ENSG00000170421
AC107016.1	ENSG00000225410
EIF4B	ENSG00000063046
RP11	ENSG00000257475
TENC1	ENSG00000111077
SPRYD3	ENSG00000167778
IGFBP6	ENSG00000167779
SOAT2	ENSG00000167780
HIGD1AP1	ENSG00000258016
ZNF740	ENSG00000139651
CSAD	ENSG00000139631
ITGB7	ENSG00000139626
RARG	ENSG00000172819
MFSD5	ENSG00000182544
ESPL1	ENSG00000135476
PFDN5	ENSG00000123349
C12orf10	ENSG00000139637

dbSUPER

Number of super-enhancer constituents: 15
ID	Coordinate	Tissue/cell

SE_04073	chr12:53467622-53468445	Brain_Anterior_Caudate
SE_05963	chr12:53441226-53470688	Brain_Hippocampus_Middle
SE_08819	chr12:53468093-53468230	Brain_Mid_Frontal_Lobe
SE_26170	chr12:53467687-53468823	Duodenum_Smooth_Muscle
SE_26816	chr12:53467642-53468840	Esophagus
SE_29628	chr12:53467553-53469038	Fetal_Muscle
SE_31505	chr12:53467636-53469154	Gastric
SE_40690	chr12:53467625-53468856	Left_Ventricle
SE_41663	chr12:53467706-53468071	LNCaP
SE_42222	chr12:53467515-53469105	Lung
SE_46658	chr12:53467711-53468524	Ovary
SE_48623	chr12:53467545-53468940	Right_Atrium
SE_52572	chr12:53467674-53468672	Small_Intestine
SE_53495	chr12:53467517-53470604	Spleen
SE_54694	chr12:53467311-53469069	Stomach_Smooth_Muscle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH12I053073

chr12

53467675

53468876

Enhancer Sequence

TGAGCCGAGA TGGTGCCACT GCACTCCAGC CTGGGGGACA GAGCGAGACT CCATTTCAAA 60
AAAAAAAAAA AAAAGATGAT GCAACCAATA ATTATCACAC ACACTGACAG ATTAAAAAAA 120
AAAAAGCAAC CCAGAGGTGC AGAAAAGTTT CCAAATGTGC TAAGTACTCC TGGCTAAGCA 180
AGGTATGTAC AGAGCTAGAA GACAAACACA AGTCTCCTGA CTTGCTGCCA AATACTTTCA 240
GTACGTGTGC TGGACAGGAG AGTGCCGAGG CGCAGATGCT AAGGCAGCAG GACCCCTTGG 300
CCAAGGCCTG AGAAACCAAT TTCCCAATGT GGGAGATGGA GTTGGAGAGA AGGGAGAGAG 360
CTGTGTGTCT CTCTCTACTA TTGGCTCCTG TCCCATCTCC TCACCACGCC TAGTCTCTCT 420
ACGAACAGGA TAGTGAAAGA GACGTGAAAC AAGGAAAACA GGACACAGAA AGGACATATC 480
CCCAAAAGTG CTCAAGTCAA AACCCAAAGA GGACCTCCAG CTTACATGGC CAGGCCATAA 540
TCTTCCCCTC TCTTTTATCT GCTCAAAACC TTCCCCCAAA TCACCCAATT CTGTTCCCCA 600
CAATTCCTGC TCATCCTCTG CTCCACTAAC TTGCCTCTCT CTGCCTGTCA TCTGGGCAAT 660
GTCCCAGCTT CCTCTGGCCA TGGGAAGTAT CTTCTCCTAC ACGCAAGAGA CTTCAGGAGA 720
ATCTGAGGCT GGACTGGAGG AGATGGGAAC TCAGTGCAAG GGTCCCTGGG CAAGCCCCAG 780
CCAGCAGACT CTTCCTAATC ACTCCCCACA 810