EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS184-00517

Organism

Homo sapiens

Tissue/cell

T47D

Coordinate

chr1:32538650-32539290

Target genes

Number: 3
Name	Ensembl ID

KHDRBS1	ENSG00000121774
TMEM39B	ENSG00000121775
KPNA6	ENSG00000025800

TF binding sites/motifs

Number: 11

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF13	MA0657.1	chr1:32538934-32538952	TACCAGTGGGCGTGGCTT	-	6.03
KLF14	MA0740.1	chr1:32538937-32538951	CAGTGGGCGTGGCT	-	6.01
SP1	MA0079.4	chr1:32539108-32539123	TGTGGGCGGGGTTTC	-	6.29
SP1	MA0079.4	chr1:32538846-32538861	GGTGGGCGGGGCTTC	-	6.7
SP1	MA0079.4	chr1:32538938-32538953	AGTGGGCGTGGCTTC	-	7.75
SP2	MA0516.2	chr1:32538845-32538862	CGGTGGGCGGGGCTTCT	-	6.71
SP2	MA0516.2	chr1:32538920-32538937	AGGGGGGCGGGACTTAC	-	8.13
SP3	MA0746.2	chr1:32538938-32538951	AGTGGGCGTGGCT	-	6.54
SP4	MA0685.1	chr1:32538844-32538861	ACGGTGGGCGGGGCTTC	-	6.28
SP4	MA0685.1	chr1:32538936-32538953	CCAGTGGGCGTGGCTTC	-	6.79
SP8	MA0747.1	chr1:32538938-32538950	AGTGGGCGTGGC	-	7.22

Enhancer Sequence

GGGTGAGCAG AGCGGCTCAG GCTCGGCCTG GCAACGAGCG GGCGCACGGG TTAGGATGGC 60
CAGGCTGCTA ATTGCTGCTC CACGCGGACA GGAGCCCGGT GACGGGAGGG GGAGGGGATG 120
CGAGCGCAGA CGGGATCCCG CCCCCTCCTG TCGTTTTGCG GGGTGGGGCC TCTGTTGTGG 180
GGGCGGGACA TTGGACGGTG GGCGGGGCTT CTAAGACGAA GCCCTGTGGG GGCTTGGGCT 240
TTCGTGAGGA CCAGCTCGTC GGGGCTAGAA AGGGGGGCGG GACTTACCAG TGGGCGTGGC 300
TTCAGCGCTA AGGGTGGAGA TTCTGGGCAG GGGGCGCTAG TGCAGTCGGC GTTTCTGGGT 360
TGGAGGGGTT ACACTGGGGG CGGTGGAGCG GGGAGACTTC CGACTGAGGG AGCCCATTCT 420
GGAGTGGGGC TTCTGGGCTG AGAGGGCTTT TATTGGCTTG TGGGCGGGGT TTCTGGGCTG 480
ACAGTTGTGT GTAGGCGGAG CTTCTGGGCT GAGGGGCTTT ATGTGGGTGC AGAGCTTCTA 540
AAGAGAGGAG AGTGGGTGTG GGCAGAGCTT CTGGACTGGA CTAAGGGTGT TTGTGTGGGA 600
TTTTCTAAGC CAAGTATAAC AGCGTATGAA CAGAGCTTCT 640