EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS184-00461

Organism

Homo sapiens

Tissue/cell

T47D

Coordinate

chr1:28832600-28832690

Target genes

Number: 20
Name	Ensembl ID

SESN2	ENSG00000130766
MED18	ENSG00000130772
PHACTR4	ENSG00000204138
Y	ENSG00000206779
RP1	ENSG00000229820
U6atac	ENSG00000221216
RCC1	ENSG00000180198
SNHG3	ENSG00000242125
SNORA73A	ENSG00000201808
SNORA73B	ENSG00000200087
PRDX3P2	ENSG00000231468
TRNAU1AP	ENSG00000180098
SNORD99	ENSG00000221539
SNORA61	ENSG00000207311
SNORA44	ENSG00000207314
SNORA16A	ENSG00000207070
RP11	ENSG00000229388
RNU11	ENSG00000209804
GMEB1	ENSG00000162419
YTHDF2	ENSG00000198492

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_13857	chr1:28831352-28838041	CD34_Primary_RO01536
SE_15100	chr1:28831392-28838103	CD4_Memory_Primary_7pool
SE_21360	chr1:28831370-28837817	CD8_Memory_7pool
SE_34487	chr1:28831462-28837999	HCT-116
SE_35630	chr1:28831533-28837920	HepG2
SE_39972	chr1:28831732-28838143	K562
SE_65238	chr1:28831521-28838064	NHEK
SE_68319	chr1:28831355-28846288	TC32
SE_68320	chr1:28831355-28846288	TC32
SE_68321	chr1:28831355-28846288	TC32
SE_68525	chr1:28831484-28846339	TC71
SE_68526	chr1:28831484-28846339	TC71
SE_68527	chr1:28831484-28846339	TC71
SE_69103	chr1:28831754-28837755	H9

Enhancer Sequence

GTGTGATCCT TGGTAAGTGT GATCAGATGC TTGCCACCGG AGTTGTGGGT CTAATGCTAT 60
AGATCAGTAG CCGAGCTTCC CTAGGAAGAT 90