| Tag | Content |
|---|
EnhancerAtlas ID | HS184-00397 |
Organism | Homo sapiens |
Tissue/cell | T47D |
Coordinate | chr1:25892640-25893330 |
Target genes | | Number: 10 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RREB1 | MA0073.1 | chr1:25893015-25893035 | CCCCACCCCACCCCCACCCC | + | 8.54 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_02010 | chr1:25890927-25896559 | Aorta | | SE_03472 | chr1:25890604-25897057 | Brain_Angular_Gyrus | | SE_04384 | chr1:25883710-25897130 | Brain_Anterior_Caudate | | SE_05146 | chr1:25875255-25899602 | Brain_Cingulate_Gyrus | | SE_05991 | chr1:25873945-25899913 | Brain_Hippocampus_Middle | | SE_06990 | chr1:25882590-25898188 | Brain_Hippocampus_Middle_150 | | SE_08141 | chr1:25882606-25897422 | Brain_Inferior_Temporal_Lobe | | SE_16249 | chr1:25886217-25892811 | CD4_Naive_Primary_7pool | | SE_17633 | chr1:25869448-25897028 | CD4p_CD25-_CD45RAp_Naive | | SE_19031 | chr1:25874010-25893424 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_53664 | chr1:25874991-25896829 | Spleen | | SE_65397 | chr1:25887914-25896024 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I025565 | chr1 | 25891281 | 25897035 |
|
Enhancer Sequence | AGCAAAGCAT TAAACAGAAA GTAACACCAT CCTGTAATCC CACAGCCCAG AGTTTTGGGC 60
TTAATTCATG CTAATCCTAT ACATATACAT TATTTTGCAT TGATCAGCTC ATCGTATTTG 120
CATTTTGGGA TCCTGATTTT TCACTTAACA GCGATGTGTC AGAAGCATTG CTCCAGGCTG 180
TTAAAAGCTC CTCGTAAACA CCTCTTCCAT TGACTGCCTA ACATTCTCTT AAGGGAAGCT 240
GCTATAATTT ACTTGACTCT CCCCTATTCT TTTGGACATG TAGGTTGTCT CCCTTTGTAA 300
ATTTATTTTT CGAACAGCAC GGTGTTGACA CAGTTATAGC CAAAGAATCT TCCGTGTTCC 360
CTCCCACAGC TTGTTCCCCA CCCCACCCCC ACCCCCGCTG CTCCCTTTAC CAGCCCCTTC 420
TCCTCTTTCC TGGGCATGTC CTGACTGAGC TGGGGCACAG AGTGGGTGCT CTGGCCTCTC 480
CCGGGGGTGG GTGCACCGCT GGCTGCCCCT GACTTTTCTG AGCTGTTTGA CTCTCAAGGG 540
GAGGTGCTTT GATCTGAGGT TACTCCACCT CCCCTGCACC GGGGGCTTCC TTCTTGGGCC 600
ATGTGCCCTG CTGTTCCCCA CTGGTGCCCC CTCGCGTCTG ACCCTGGGGC GCGCCAGCCC 660
TCACCCAGGC TCTCGGCTCA CACAGCTCTG 690
|
