| Tag | Content |
|---|
EnhancerAtlas ID | HS182-14018 |
Organism | Homo sapiens |
Tissue/cell | Spleen |
Coordinate | chr20:47410660-47412170 |
SNPs | | Number: 2 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Gata1 | MA0035.3 | chr20:47411819-47411830 | TCCTTATCTGT | + | 6.14 | | RFX2 | MA0600.2 | chr20:47411200-47411216 | GGTTGCCATGGCCACG | - | 6.14 | | RFX2 | MA0600.2 | chr20:47411200-47411216 | GGTTGCCATGGCCACG | + | 6.35 | | RFX5 | MA0510.2 | chr20:47411200-47411216 | GGTTGCCATGGCCACG | + | 6.59 | | RFX5 | MA0510.2 | chr20:47411200-47411216 | GGTTGCCATGGCCACG | - | 6.6 |
|
| | Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
| SE_03141 | chr20:47410330-47411493 | Brain_Angular_Gyrus | | SE_03860 | chr20:47410092-47412793 | Brain_Anterior_Caudate | | SE_04767 | chr20:47409872-47412872 | Brain_Cingulate_Gyrus | | SE_05768 | chr20:47409816-47412786 | Brain_Hippocampus_Middle | | SE_06681 | chr20:47409782-47412900 | Brain_Hippocampus_Middle_150 | | SE_07719 | chr20:47409747-47412968 | Brain_Inferior_Temporal_Lobe | | SE_09151 | chr20:47409903-47412908 | CD14 | | SE_59612 | chr20:47363420-47493230 | Ly4 | | SE_62157 | chr20:47397376-47416609 | Toledo | | SE_65415 | chr20:47410081-47411731 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 4 | Chromosome | Start | End |
| chr20 | 47410836 | 47411334 | | chr20 | 47411413 | 47411582 | | chr20 | 47411200 | 47411846 | | chr20 | 47411311 | 47411704 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I048794 | chr20 | 47410538 | 47411704 |
|
Enhancer Sequence | GCAGGCTCTC ACTGAGCTAC TGGGAGCTGC AAACGAGCCC CTCTAAACCA AGGCCCTGTC 60
TCTGAGCACG GAAGGGACCT CAAGGTGCCC TGCACCTCAT TCTCAGATGC AGGGACCAGC 120
CTGTGAATGA AGTATCAGAA GCCAGACAGT GAGAGGGAGA AACAGAGGGA GATAGGGGCA 180
CAGAGAATGA GACTGAGACA GAAAAACAGA GAGAGGGAAG GCAAGGGGCG GACAGAGAGT 240
CCTGAAGGAA GCTGGAGGCA AAGCTGGGAA GACAGAGCTA ACCAGGACAA TGAAAACAAG 300
AGCTCTCTCT CCACTCCAGA AGGAAAGAGG CCAGGAGGCA GAGAGGAGGC CCAGCAGGAG 360
CCTTTGCTTG GGGTCCTTCC CACACTGCAG GGCAGCACCA GTACTGCCCA GGAGCCCCCA 420
TCAGTGGGTG GTGGGGGTGG CTTCCCAGCC AGGCTGGAGC CTGCCAGGGC AGCCTCTGCA 480
GAGGAGGAGG CCGGCTGGTC AGGCTGGGGG CTGGGCCGGG AAGTGCCAAG CACCCAGCCA 540
GGTTGCCATG GCCACGGAGA CAAAGAGAGG GGCTGAGGAG AGGCCCAGGG ACAGGGTCCC 600
TAAGAGGGGC CCCGGCTGCC TACAGTCCTC GGGGACTGGG CCTTGGATGT TGGGGAGACA 660
GCAGTGCTAT TTAACATTTA TTGAGTGCTT GCTGGGTACC AGACAGCAGT CCTATGGGGA 720
AGCTGTTTTA CAGATAAAGA AACTGAGGCA CAGAAGCGAG CCACTGCAGT ATCTCATAGG 780
GGTTTTTGTG ACTAGCCTAT GAGTTGATTA AGTGAAACTC TTTAGTACAG TTCCCAATGT 840
ATTGAAACCC TCACATGTCA ACTATTATTG CAAAATGTCA CCAAAAGTCA GGTGACATTG 900
TTAATGTAAT TCTCTTGCGT CCTTATCCTC AGTCACTAAC ATGACACCTG ATGTGTCATG 960
TATGTATTTG ATGACCGGCT TACTGTCTGC CTCTTACCAG AGGGTTAGAT CCATAAGGAC 1020
AGGGGCTCGG GTCTGTTCCA TCACCCACTA AACACTCAGC TCAGCCCAGA ACTGTACCTG 1080
GCAGAGCTGG GATGCTGGTT CTGCCACGTA TTTGCTGTGT GACCCAAGAC AAATGACTCA 1140
ACCCCTCTGA GCCTCCATTT CCTTATCTGT GGAATGGGAA TACAATGATG ATGACCTTGC 1200
CCACATACAG AGAGGCTCAA AGAAGGATGC TCCTGCAGCA CTGCTTAGTA CAGACCAGTG 1260
ACTTTCAAAT GAGGGCAATT TTGCTTGCCC CAACCCCCCA CCCCTGAGGA CATATGGCAC 1320
TGTCTGGAGA TATTTTTGGT TGTCACAACT GAGGAGGAGG GTGCTTTTGG CTGGTGGGTA 1380
GAGCCAGGGA CGCTCCTAAA CATTCTACAA TGCACAGGAT AGGATAATCC CCCACAACAA 1440
AGCCCCAAAT GTCACTAGAG CTGAGGCTGA GAAATCCAGA AGAAAAAGAA AAAGGCAGGA 1500
ACCACCAAGA 1510
|
