| Tag | Content |
|---|
EnhancerAtlas ID | HS182-08914 |
Organism | Homo sapiens |
Tissue/cell | Spleen |
Coordinate | chr17:3879370-3881400 |
Target genes | |
SNPs | | Number: 3 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Pou2f3 | MA0627.1 | chr17:3880690-3880706 | CCTCATTTGCATACCC | - | 6.15 | | RARA(var.2) | MA0730.1 | chr17:3880386-3880403 | TGACCTTGGCATGCCCT | - | 6.81 | | RFX1 | MA0509.2 | chr17:3879984-3880000 | GGTTTCCATAACAACC | - | 6.02 | | RFX1 | MA0509.2 | chr17:3879984-3880000 | GGTTTCCATAACAACC | + | 6.03 | | RFX2 | MA0600.2 | chr17:3879984-3880000 | GGTTTCCATAACAACC | - | 6.17 | | RFX2 | MA0600.2 | chr17:3879984-3880000 | GGTTTCCATAACAACC | + | 6.22 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_23296 | chr17:3879161-3882957 | Colon_Crypt_1 | | SE_23883 | chr17:3879176-3881572 | Colon_Crypt_2 | | SE_24983 | chr17:3879150-3881536 | Colon_Crypt_3 | | SE_32031 | chr17:3879134-3883010 | Gastric | | SE_50419 | chr17:3879120-3882989 | Sigmoid_Colon | | SE_60262 | chr17:3862322-3890678 | Ly4 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr17 | 3879925 | 3880580 | | chr17 | 3881152 | 3881372 | | chr17 | 3879385 | 3879642 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I003976 | chr17 | 3879635 | 3882730 |
|
Enhancer Sequence | GTGCCAGTCT TGTGCTGCAC CTACCAGCAG GGGAGAGGGC TCCAGCTGTC CTAGCCCAAG 60
CCTGACCAGT CTGCCTGCAC GGCCTCAGCT GGAAGTGGGT TGTTAGTGCA TAAGACACAA 120
AATCCCTGTT TGCCTTGTAA ATTGTTACAC CCCACCGAGC TTGCAAGCCT TAAGGCACAA 180
CTGGAAAAGG CATTTTGAGA TCTGGGACTT GCTCCCTGGT ATGGGGAAGA GGCTGTTGGC 240
TTGGGGGTGC CTGAGGGCAA GTCGTCAGGC CCTGAACCTG GAGGGCCAGC CTGACTCCTG 300
TGTGCAGGGG CTGGGGGGTG GGGCTGCGGC TTCACCTCAG GGGGTGCTCC CAGGCCTGGG 360
GCTGGGTTAG GGTGGCTGGG CAAGTCCTCA CGCTGGGCTG GGTTCTCCCG GGTACCACCC 420
TAGCTGTGGG AGTCTGGGAA CACCCCTTCC CCTCTGAACG CAGGGTCGCT GTGAAGTGGG 480
GGTGGGACAG CGTCTGGAGG TTGCAGGGTC CCCGGCCGCG AGGATAAAGC GGCAGGAGAC 540
CGGGGCCCTG GCCTTGGCTC TCAGGCTCTA TTTGTAGGTG CACAGCGTTC CCTGCCCCCA 600
CTGCCTGTAG TCCTGGTTTC CATAACAACC CTGGACTGTT CTTGACCCCT GAGGCTCAGC 660
TGTTCTGACT TTCCCTCCTG GATGCCCTTC TGGGTCTTCT CGTTCGGCAG TGCCAGGTCT 720
CCGCCCTGGT GTTCCCTGCG TGGGCAGCCA GCCCAGCTCC CTGGGGATAT CCTGTCACTG 780
TGGCCCAGAG CCTAGGCCCG GCGTCTGCCA GGTCAGGCCT AAGCGCTCTG GGTTCTTTCC 840
AGGTCCTCAG ATGGGGCCCG GGAACCCAGA GAGGTGGAGG AAGTTGGCAG CGGCACCCAG 900
ATCCCCAGCG TGGCAGGGCT GGGCACTATG TCCAAACCAC CTGACGCCTG GGCTGCAGCC 960
AACCTCTGCG GCAGACGCAC AGGTGGGGCT CTCGGATCCA TAGCTGGGCC TGTGGGTGAC 1020
CTTGGCATGC CCTCTATCTC TCTACGCTGA CTCCCTGAAG CCATAACTTA CGGCACACCC 1080
AGCGCAGGCC CAGTGGACCC AGGGGATCTG CAGGGCAGGT GAGCGTGGTC ATTCCCAGAG 1140
TGGCTATTGG GTGCTGGGAG TTGCTGGGCC TCGAGCTGCT GTCTGGACAC AGTGGGGGCT 1200
CAGGGTGGGA GGGAGCTTCA GTTAGGCTCT GTCCCCTGGC TTCCAAAAAC CAGACTCCAG 1260
GAAAATGTTC AAATTTGCAA GTTGGCGTCC ACGTGTCTTT AATTCCCTGG ACCCACATCC 1320
CCTCATTTGC ATACCCAAAT CAGCCCACGC CCTCCTGGGT CAGCCCACCC CAAAAGCAGC 1380
ACTTCCAAAG GCAGCTGCTG GGGCCGATGG AAGGATGGGA CCAGGAGAGG GTCTGCCCTT 1440
GGCCCTCGCA GCCCTCTCCA CTGTGAGGGT GTCAAGTAAC CGTGGTTCAC ACGAACTGCA 1500
TCCTGGCTGA TGGAGGCACG GGGCTAAGTG CATTGCTTCA TCCTCAGAAG CAGCCTCAGA 1560
GTGGTGCTAT TACACCCAGT GAAACAAGGG CCACACGACC AGTATATGGG ACAGCAGAGA 1620
TTTCCTGCAG GTCATGTGGC CCCAGAGCCC AGGCTCGTAA CCTCTGTGCT GGACAGAAAG 1680
AGTGCTGGAG TTTTTGTCCC TGGTCGCCAG GCAGTGCAAG TTCTAACTCA AAGCCCCTGC 1740
TCCCGAGCAC TGAGTTAGAT AGTCCTGAAG ATGGGCCTGG AGCCTCTTTG GCCCCCAACA 1800
TGCCCTCAGT ACCCTCTCCA AGGTCCCCGA GGTACCTGCC AGTCACCCTC GGCTAGGTTA 1860
AGGACTCCAC CTGAGAAGTC CGTTGGCTTC AGTCTTAGCT CTACTGCGTG ACCTTAGAGG 1920
AGCGGCTCCA CCTCTCTGAA CCTCAGTTTT CTCACTGTGA AGTGGGAAGC ACGGCGGTCC 1980
CAGTCCTACA GGGTCATTAT GAGTGCCACC TGAGATGGCG GACATAGGGG 2030
|
