Tag | Content |
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EnhancerAtlas ID | HS180-30202 |
Organism | Homo sapiens |
Tissue/cell | Small_intestine |
Coordinate | chr20:47354630-47356380 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Myod1 | MA0499.1 | chr20:47355227-47355240 | GGGGACAGCTGCT | - | 7.04 | Myog | MA0500.1 | chr20:47355230-47355241 | GACAGCTGCTG | + | 6.14 | SOX10 | MA0442.2 | chr20:47355989-47356000 | TCCTTTGTTTT | - | 6.32 | Sox3 | MA0514.1 | chr20:47355990-47356000 | CCTTTGTTTT | + | 6.02 | Tcf12 | MA0521.1 | chr20:47355230-47355241 | GACAGCTGCTG | + | 6.02 |
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| Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
SE_01671 | chr20:47354368-47357034 | Aorta | SE_03141 | chr20:47353753-47357193 | Brain_Angular_Gyrus | SE_03860 | chr20:47352646-47357274 | Brain_Anterior_Caudate | SE_04767 | chr20:47330290-47357597 | Brain_Cingulate_Gyrus | SE_05768 | chr20:47330773-47357344 | Brain_Hippocampus_Middle | SE_06681 | chr20:47321409-47357433 | Brain_Hippocampus_Middle_150 | SE_07719 | chr20:47329977-47357562 | Brain_Inferior_Temporal_Lobe | SE_08847 | chr20:47354585-47355007 | Brain_Mid_Frontal_Lobe | SE_09151 | chr20:47353839-47357374 | CD14 | SE_11697 | chr20:47353783-47356584 | CD20 | SE_14588 | chr20:47354199-47356996 | CD4_Memory_Primary_7pool | SE_16488 | chr20:47355140-47356190 | CD4_Naive_Primary_8pool | SE_18054 | chr20:47354068-47357368 | CD4p_CD25-_CD45ROp_Memory | SE_18819 | chr20:47354063-47357233 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19386 | chr20:47354052-47357337 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20065 | chr20:47354132-47357341 | CD56 | SE_22493 | chr20:47354199-47357283 | CD8_primiary | SE_32607 | chr20:47354044-47358612 | GM12878 | SE_42516 | chr20:47353714-47355907 | Lung | SE_42516 | chr20:47355916-47357322 | Lung | SE_50554 | chr20:47354020-47356510 | Sigmoid_Colon | SE_53697 | chr20:47354561-47355631 | Spleen | SE_65415 | chr20:47354581-47356039 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I048738 | chr20 | 47354074 | 47357229 |
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Enhancer Sequence | TCTCCACAGA GATGAAGGGA AGGGACTGGG CCAGAAAGCA GGGACAAATC GGTTTCTTCC 60 CACATACCAA CCCCAGTCAC TGGGTAGTGC CAGCTGGAAC ACTGGTGAGG AGGATTCTGG 120 GGCCCCACAG GAAGCCTAGA GACAGAATGC TGTGATTGAT TAGGAATGTC TGCCACAGGT 180 GCAGGAGAGG GGGTAACAAG CTCACCACTG GTTTGTCATT CCTCATCCCC TGAGCCCCCT 240 TCTACGACAA GGTCTGCAAT GTTTTCCTCT CCTTCAGCCT GTGGGAAGGG CAGGGGCCCA 300 ACGCTTGAGG CTTGGAGAAG TTAAATTTAG CAAAGGACAA CATCCCCTCT GCAGCACCGT 360 GCCCAGTTCA ATCACGCCTG TGTCCTTTCA TCCAGCCTGA CCCCAGCTGC ATCTCAGGCC 420 TGAGACCCTG CAAATACGGA AACGCTGCTC TTGACAGCTC AGAGTCCAAG TGTTCCATTT 480 CCTCCTGGAG GCCCGACATG GGGCTCTGAT TGCTTTGCCA GGAAGAAACG GACAAACAGT 540 TGTGCATACA CAGATGTGGT GGGTACGGAA CATGTGGCTG TGGGTTTGGG GGGAGAAGGG 600 GACAGCTGCT GGCTGGAAAC AGCCAGGGGA GGGGAGCTCA CCCCCAGGAA AGGCTCAAGG 660 ATTGTGAGAG GTGGCAGCTG CTGTCCACAA TACCCAGGTG ACAGTGGCTC CACAGAGACC 720 ATCAGCTCCA AACCACTCAT TTCACAGCCA GCAAGACTAA GACCCAGAAG AGGGAAGGAG 780 CTGGCCCATG CAGACATATT CTCCAGTGGG GAGGAGAGAA GTGAGAATCA GGTCTCAGTT 840 TCTCAACAGT CTCCCCAAAT TATTTACCCA TCCATACAGC TGTGGGGAGA GGGGGGTTAA 900 AACAGAAATC AGACCACACT ACTCCCGTGC TTAAAACCTG CAATGGCTTT CACTGACTCA 960 GAATAAGATC TACAGTCCTC ACCTCGGCAC GCAAAGCCCT ACAGGATCTG CCCTGCCCCC 1020 ACTATGACAC CCTCAAACTC TCTCTATCAC TCACTCTGCT CTGGCCACGC CAGTCTCCCT 1080 TCTTCTCTCA AATGAGCTAA GCTTGCTCCC AGCTCAGGGC TTCTGCCCTT TCTCACCTTG 1140 GTCCAGACCA CCCTCCCCAA GATCATCCCA TTCCAACCCC TCAGAAAGGC CATCCCACCC 1200 TTGGGTTGCC AGATATAAAA TAAACCCCAG GATGCCCAGG TGAATGCTCA TTTCAGACAC 1260 ATATTTTTTT TAGTATAAGT ATGTCTCAAA TATTCCATAA GACATGTTTC CACTAAAAAA 1320 TTATTTGATG TTTACCTGAA ATTCCAATTT CCCTGGGTGT CCTTTGTTTT CATTTGCTAA 1380 ATCTAGCAGC CCTGGCCCTG ACCTCCCGAT TGAAAGCAAC CTCAGGCAGA GTCACTCTTT 1440 ACCACATCTG CATTTTATGT TCTTCACAGT CTGCACTGGC ATCTGAAATG ACCTCATTTG 1500 TTAAATTACC CTCTGTTTCT CCCACCTACG AGCCGCGTGG CAGCACGGAG CAAGTCTGTC 1560 TTACTTAGTA CAGCATCCCC AGGGTCTAGT GCAGAGCCTG GCACACAGGA GATGCTTACT 1620 ATGTATTTCA GGAGACCTCA TCACATAAGA GTAAAAAACA CAGACTCTAC AGCCTGACTG 1680 TGTCAGCTCA AATCCTGGCT CTGATGCTTC CTAGCTCTGT AAGCTTGCCC TATAACTTAA 1740 TCTCTCTGGG 1750
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