EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS180-04969

Organism

Homo sapiens

Tissue/cell

Small_intestine

Coordinate

chr1:234767310-234768000

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SOX10

MA0442.2

chr1:234767710-234767721

GTCTTTGTTTT

6.14

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_02269	chr1:234766648-234768179	Astrocytes
SE_27616	chr1:234766773-234768485	Fetal_Intestine
SE_28535	chr1:234766742-234768395	Fetal_Intestine_Large
SE_33813	chr1:234767390-234768203	HCC1954
SE_35855	chr1:234766842-234768530	HMEC
SE_36944	chr1:234762739-234768752	HSMMtube
SE_38070	chr1:234765438-234768743	HUVEC
SE_44801	chr1:234767174-234768110	NHLF
SE_45603	chr1:234766021-234768581	Osteoblasts
SE_51731	chr1:234766819-234768264	Skeletal_Muscle_Myoblast
SE_55820	chr1:234762685-234769053	u87
SE_63516	chr1:234766739-234768225	HSMM
SE_64258	chr1:234767043-234768222	NHEK
SE_67634	chr1:234762685-234769053	u87

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I234630

chr1

234766501

234769475

Enhancer Sequence

CCCACCACTT TTTTTTGTTT GTTTTTTATC TCTGTCAGTT TGTTACCTTT ATTCCTGAAA 60
GAAGGACTCA AGACTCATGT GATACTCTAA AATAGATATT AATAGGAAAT GTTCCTAGAC 120
AATGTGGGTT TGCAAGAGAA ACAAAGAATT TATTGTTGAC TTGATTACTA GCTCAAAGTA 180
ATCAGAAATT CCATGAAAGA CACTGAAAGT TGACCTCTTT TAAAACTACT TTCAAAAGCG 240
GAGGTTGATT TGTATTTCTT AATCAGCATC TCAGAACAAT GTACATTCTT TTTGTATAGT 300
GTCATGGGCA TCTGGGACTT TGGCTTGATC AACATCCACT TCCTCCTGTG ATACCAAGAC 360
CCTAGTTTTC TTTTAAAGAA CCACCCCTCC CTGACTCTCA GTCTTTGTTT TCTGGTGGGG 420
TTGACTCTTA CCCCTAACCC CAGGGGTGGG GCATGTGGTC CAAGTCTGGC CAATGAGAAT 480
TTTAACCATG CTGGTGATTC AAGAATGAGT ATATGTTACA TGCTGAGCTT ATCAGAACCA 540
ACATTGTCAG CCACAGGGGT TATGCTAGAA GTATTGGAAA GGATAAATTC TCTTCTGGGG 600
TGGTTAAACC AATAGAAAAT TAGCCTGGAG CTTCTGGTGG ACATCTTGTC AAAAAAATAG 660
TGATTGCCTG CTTGAGAATG AAATCAAGAG 690