EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS180-02588

Organism

Homo sapiens

Tissue/cell

Small_intestine

Coordinate

chr1:109934660-109935640

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ALX3

MA0634.1

chr1:109935156-109935166

TCTAATTAAA

6.02

dbSUPER

Number of super-enhancer constituents: 20
ID	Coordinate	Tissue/cell

SE_00157	chr1:109929953-109941641	Adipose_Nuclei
SE_02005	chr1:109934708-109936321	Aorta
SE_03215	chr1:109931296-109936545	Brain_Angular_Gyrus
SE_04040	chr1:109930394-109940335	Brain_Anterior_Caudate
SE_05356	chr1:109930952-109945513	Brain_Cingulate_Gyrus
SE_06107	chr1:109931172-109945456	Brain_Hippocampus_Middle
SE_07107	chr1:109929910-109945434	Brain_Hippocampus_Middle_150
SE_07932	chr1:109930937-109940557	Brain_Inferior_Temporal_Lobe
SE_08895	chr1:109933973-109936356	Brain_Mid_Frontal_Lobe
SE_15247	chr1:109929872-109938319	CD4_Memory_Primary_7pool
SE_25953	chr1:109930919-109940149	Duodenum_Smooth_Muscle
SE_37170	chr1:109931293-109942513	HSMMtube
SE_40487	chr1:109930540-109936493	K562
SE_41532	chr1:109930456-109936421	Left_Ventricle
SE_42997	chr1:109931321-109936405	Lung
SE_48481	chr1:109931246-109936447	Psoas_Muscle
SE_51673	chr1:109930686-109941638	Skeletal_Muscle
SE_52183	chr1:109933080-109935072	Skeletal_Muscle_Myoblast
SE_52183	chr1:109935165-109936978	Skeletal_Muscle_Myoblast
SE_63994	chr1:109932869-109937819	HSMM

Enhancer Sequence

TGTCAAATGT GATGGCTTTG TCTGCCTTAA TATTAGCTCC TAATTATATA AAATATCTGA 60
GCCTCATTTC TGCAGCCTCA AAACATAGTT CACTTTCTGT AAAAAAAATT GAGGGGTAGG 120
ATTAGGTAGG AAGGAGGGAG AAGAACAAAC GTTACTCCCC CGTCCTGACC ATTACAACTT 180
GGTGCTAAGC ACTGCCCAGC ATGTGATGGT CACACAAGGG TAACAGGCCA ACTGGGACAA 240
AGTTGGGGAA CGCAGACTCT GCAGTCACCC ACTGAGAACC CAATGCCTGT TGACGAGAGT 300
TGACTGGAAA CTGGCAGAGT GCAGAAGAAA CTGCTAATAG TATCTGTGAC CCTGACATGA 360
AAGATCTGAT CAAAACAGCA GGATAGAAAG CCTATTATTG TTGTTAATAA TCACAAAAAG 420
AAAATAGCCA TTAGAAATTG AACAGAACAT AAGCCTTCTT CCAATTATTT CCACAAGCAG 480
ACATGAGACT CAGATTTCTA ATTAAAAATC ACTGTGCACA GAGCCAAACA TTTGAGTCAG 540
CAGAGAACTT ACCTAATTGT TAACACTGCA TTCCCTTGGA GCCATCTGTC ATACCTGGCT 600
AGCTTTCTAC TCTCATCCCA ACCAAACTTC AGATGAAGAC TAACCTTTCC CCAGATAAAT 660
TACACTTCAT CAAATCTGCT GATACTTCTT ACTGAAATAT CCAATGCATA AGTCATTTTA 720
ACATCCCTCT AGGGGCTAAA GGTCTGACTA TACATTGCAT GAGAGAAGAC TCTTCATGAA 780
GGTTTCGCTC ACTCTGCTCA ACCAGGACCA AGAAGGAGAT CCTACAGAGT TCCTACTCCT 840
TGATCCAAAG CTGAATGGAA GAAACAGAAC TCAAGAGACT ATTAAATAAG CTAGACGGCT 900
GGGGGTGCTA GGGAAGGTAG GATGAAGAGA GGCCAAGTAT TGGAAGAAAT GAGGCAGTTA 960
GGAAGTTCCG GGGCATTAAA 980