Tag | Content |
---|
EnhancerAtlas ID | HS179-22326 |
Organism | Homo sapiens |
Tissue/cell | SkMC |
Coordinate | chr6:30761200-30762490 |
SNPs | Number: 3 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr5a2 | MA0505.1 | chr6:30762198-30762213 | CCTGACCTTGGCCTC | - | 6.4 | RARA(var.2) | MA0730.1 | chr6:30761571-30761588 | CGACCCTTTCTTGACCT | - | 6.25 | ZIC1 | MA0696.1 | chr6:30762370-30762384 | GACCACCTGCTGAG | + | 6.13 | ZIC4 | MA0751.1 | chr6:30762370-30762385 | GACCACCTGCTGAGA | + | 6.03 |
|
| Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
SE_25936 | chr6:30761068-30762251 | Duodenum_Smooth_Muscle | SE_31499 | chr6:30761075-30761781 | Gastric | SE_37990 | chr6:30761085-30762297 | HUVEC | SE_38900 | chr6:30761181-30762059 | IMR90 | SE_40555 | chr6:30761316-30761950 | K562 | SE_40867 | chr6:30761140-30761958 | Left_Ventricle | SE_42338 | chr6:30761135-30761928 | Lung | SE_48770 | chr6:30761183-30761907 | Right_Atrium |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH06I030792 | chr6 | 30760579 | 30762685 |
|
Enhancer Sequence | GCTGTAGTGT AGTGGTGCGA TCTTGGCTCA CTGCAGCCTT AACCTCCCAG GCTCAAGCAA 60 TCCTCTCACT TCAGCCTCCT GAGTAATTGG GGCCACAGGC TCACACCACC ATGCCTGGCT 120 AATTTTTTAA AAAAATTTTT ATAGAGACAA GGTCTTGCCA TGTTGCCCAG GCTGGTCTTG 180 AACTCTTGGG CTCAAGTGAT CCTCCTGCCT CAGCCTCCCA AAGTGCTGGG ATTACAGACA 240 TCAGCCACCG TGCCCAGCCC AGAATCTTTC AACCCCCAAA ATCCATTGGT GTGGGGTTAG 300 ATGAGGGATC CTAAAAGGAG AGGGAGGCTG CTGTGCAGTG ATCCCACCGG CCTGCTTGCA 360 GGAAGGAGAG CCGACCCTTT CTTGACCTCT ACCAAAGACA CTAGAGAGCT TTGTAAATCT 420 TCCAATTAGA TGATACATAA ATACTTCCCC AGGTCTTCTA GGCCTGATTC AATAATATTT 480 ACTTCGAGAG GCTGCTGCTT CCTGTTTGTA TTCTCTTACC ACAAGTTATC TGCTGTTCCT 540 ACTTTCACTT AAGCTTTGTA TCGTACTCTG TGAGAAATGT TTGAGCTGGC TGGACACATT 600 TCCTGAAATC ATTTCTCTAG TCTTTTACGA AATGTCTGCA TTTATGCTGG AATCATAGAG 660 CTGAACTATC ATTGAGATAA AAATTCCAGT CTTTACCCCA ATTTACAATT CCTAAAAACT 720 GTCACTTTCT TAGATCTCTT CACATTTTCA TTACTTCTTT TTTTTTTTGT TTTTTGTTTT 780 TTGTTTTTTG AGACTGAGTT TTGCTCTTGT TGCCCAGGCT GGAGTGTAAT GGTGCGATCT 840 CGGCTCACTG CAACCTCCGC CTCCCAGATT CAAGTGATTC TTCCTGCCTC AGTCTCCTGA 900 GTAGCTGGGA TTACAGGCGC CCGCCACCAT GCCCGGCTAA TTTTTGTATT TTTAGTAGAG 960 ACAGGGTTTC ACCATATTTG GCAGGCTGGT CTCAAACTCC TGACCTTGGC CTCCCAAAGT 1020 ACTGGGATTA CAGGCGTAAG CCACCACACC TGGCCAGACA TTTTCATTGC TTCTATTACC 1080 TGTGTAAGCA AGTGGCTTTA TTGGGAGGCG ATTTTCACAA AGAAACAAGG TTTTTTAAAA 1140 AAGGTGTTTC CCGTAGGTTT CTGCCTGTGA GACCACCTGC TGAGAAATGC AGAGCCGCTT 1200 TGGGAAGCTG GGTAGTCAGC TCTCATCCAT ACTCACTCAA CCATGCCCAG CTGGGCAGTG 1260 CCACTTGTGT CTGAGCCTCA GCAAAACTGC 1290
|