Tag | Content |
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EnhancerAtlas ID | HS179-17618 |
Organism | Homo sapiens |
Tissue/cell | SkMC |
Coordinate | chr20:290020-291350 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr20:290776-290794 | CCTTCTCCCCTTCCTTCC | - | 6.65 | EWSR1-FLI1 | MA0149.1 | chr20:290788-290806 | CCTTCCTTCCCTCCCTCT | - | 6.94 | EWSR1-FLI1 | MA0149.1 | chr20:290780-290798 | CTCCCCTTCCTTCCTTCC | - | 7.43 | EWSR1-FLI1 | MA0149.1 | chr20:290784-290802 | CCTTCCTTCCTTCCCTCC | - | 9.47 | KLF16 | MA0741.1 | chr20:291228-291239 | GCCCCGCCCCC | + | 6.02 | KLF5 | MA0599.1 | chr20:291228-291238 | GCCCCGCCCC | + | 6.02 | RFX1 | MA0509.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | + | 6.63 | RFX1 | MA0509.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | - | 6.66 | RFX2 | MA0600.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | + | 7.13 | RFX2 | MA0600.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | - | 7.14 | RFX5 | MA0510.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | - | 7.08 | RFX5 | MA0510.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | + | 7.21 | SP1 | MA0079.4 | chr20:291225-291240 | GAGGCCCCGCCCCCC | + | 6.52 | SP3 | MA0746.2 | chr20:291227-291240 | GGCCCCGCCCCCC | + | 6.11 | SP4 | MA0685.1 | chr20:291225-291242 | GAGGCCCCGCCCCCCAG | + | 6.04 | ZNF263 | MA0528.1 | chr20:290776-290797 | CCTTCTCCCCTTCCTTCCTTC | - | 6.6 | ZNF263 | MA0528.1 | chr20:290766-290787 | CCCTCCCTCCCCTTCTCCCCT | - | 6.81 | ZNF263 | MA0528.1 | chr20:290784-290805 | CCTTCCTTCCTTCCCTCCCTC | - | 7.27 | ZNF263 | MA0528.1 | chr20:290772-290793 | CTCCCCTTCTCCCCTTCCTTC | - | 7.35 | ZNF263 | MA0528.1 | chr20:290793-290814 | CTTCCCTCCCTCTCTTCCTCC | - | 7.59 |
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| Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
SE_04571 | chr20:289111-292182 | Brain_Anterior_Caudate | SE_05672 | chr20:288550-292373 | Brain_Cingulate_Gyrus | SE_06604 | chr20:288859-292008 | Brain_Hippocampus_Middle | SE_07456 | chr20:288751-292193 | Brain_Hippocampus_Middle_150 | SE_08506 | chr20:288447-292351 | Brain_Inferior_Temporal_Lobe | SE_29860 | chr20:289076-292911 | Fetal_Muscle | SE_54219 | chr20:289529-291501 | Spleen | SE_64903 | chr20:288518-291179 | NHEK |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I000307 | chr20 | 288611 | 292808 |
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Enhancer Sequence | ATGGTATATG GGCCTCCAAC TCTACTCTTG TTCTGAGCCC CACAAATGCC CATTTGGTTC 60 TGTCATTTCT TTGCATAGAC AAGCTACATA ACCTCTCTGA ACTTCAGTTT CCTGAGCAGG 120 AAAATGGGTC TATGGTAATA ACTACATTAT CAGGGCTGGT GAGAAAATGA AATAAAATAA 180 TCCATGTCAA GGGCTTGAGA AGAATGCCCT CTGGCTGTCG TCTCCTATGA CTTCCTGTAT 240 GATCTCCAAA CTGCTCTCTT TGCAGGGTTT CAACACGGCT GCTCCCTCCT GCCTCCTTAC 300 CCACAGCCAA TAACCTCCCC ATTCTCTCCA CCTAGTCAAA TCCCACCGTC TTCAATTGTG 360 ATAATAGCTG GTTGATTGCA CGTTTACTAC GTTTCAGGCA TTGTATTAAG AACTTTCCAT 420 GCATTAACTC AGTTCTGACA CCAACTCGAT GAAGCAGGCA CTGTTTATTA TTCCCCAAAC 480 ACAAAGACAC AGGGATCTGG AGACTGGAAG CACTGGCGGC TGCAAGTGGC AGGGCTGGCG 540 GGGTGTGAAG CCGGAGAGGA GTCTTTCTGC AGTCAGGCCT CCCAAATCCC GGGATGGAAT 600 CAAGGAGCCT TTGGCTGTCC CACCCCTCCT CCTCCAAGCC CCCAAATCCA AGTCTGTTAT 660 ATCCCGTCAG CTCTGCGGGC CTGCCTGTGA CTTTCAGCCC AAGGGGGCGG GCACTTCGTG 720 TCACGCCACG TTGTCCACAT CATCGACCCT CCCTCCCCTT CTCCCCTTCC TTCCTTCCCT 780 CCCTCTCTTC CTCCCATTGA GTGCCAGTTC TGTGCCAAGC TTTGCTGTTC AAAATGTTAC 840 GAGTGGAGAA GTCAGGGAAG GATGGAATTA TAGGTGTTTC TTCTTCATAC CTTTCTGTTT 900 GGCTGATTTT TTTTCAAATG AGCACGCAGG CCCGGTTCCT CAAACCCACT TCCAATGTGG 960 CATTGCTGGG TTGGTTTGGT CCAAGGAAAG CCCTGTCTCC TTAACTCCCA GCCCCCACGC 1020 CTCCTCCGCC GGCCCCCAAA TCCAGGCCGC CCTGCCCCCT CCGGAAAGGG GAGTTGGGGG 1080 CGAGCGCCGA AATCTGAGTG GCTCTTTCAA GCCTCCGTTG CCATAGAAAC CGGCCGCACA 1140 GGCCGATGCT GTCCATTACA CCATCCTCTA GCCTCGCAGC CAATGGACTC CGAGCTCCAT 1200 CGCCAGAGGC CCCGCCCCCC AGCTCTGGGG AGTCCACCAA TCAGCAGGTC CCGTGACTTA 1260 GAGCCCTGCC CTCGGCCCAG GGACACCACC AATGCGCTTC GACCCTGCCC TCCTTCTCTT 1320 CGGTGTAACA 1330
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