| Tag | Content |
|---|
EnhancerAtlas ID | HS179-16112 |
Organism | Homo sapiens |
Tissue/cell | SkMC |
Coordinate | chr2:28583270-28584740 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| MAFF | MA0495.3 | chr2:28583982-28583997 | GGGCTGACTCAGCAC | - | 6.05 | | MAFF | MA0495.3 | chr2:28583982-28583997 | GGGCTGACTCAGCAC | + | 6.08 |
|
| | Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
| SE_20015 | chr2:28580994-28584412 | CD56 | | SE_22508 | chr2:28581176-28584226 | CD8_primiary | | SE_23736 | chr2:28581652-28583544 | Colon_Crypt_2 | | SE_24706 | chr2:28581304-28583615 | Colon_Crypt_3 | | SE_31386 | chr2:28581241-28583563 | Gastric | | SE_34659 | chr2:28581009-28584958 | HeLa | | SE_50076 | chr2:28581169-28583418 | Sigmoid_Colon | | SE_51112 | chr2:28583810-28584935 | Skeletal_Muscle | | SE_62927 | chr2:28581266-28660518 | Tonsil | | SE_65553 | chr2:28582948-28584730 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr2 | 28583371 | 28583537 | | chr2 | 28583784 | 28584228 | | chr2 | 28583781 | 28584578 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH02I028358 | chr2 | 28581236 | 28585206 |
|
Enhancer Sequence | GGAAGTCCCC TGTGTCTGGG TGTGCCTGGG TGGCAGTGTA GGGGCAGGTG TGGTGCCCAC 60
ATTGTCCATA TGTCCTCACC CGCCCCAGGC CCCAGGCCCT CTGCCTCAGG GTGGGGCCGC 120
AGCTCAGCTT TGATGCCCCT GAGGGCCTGC CTGCCGGAAC TGCTGTTTCA GGCAGGAGGT 180
GGGAGGACGC AATGCAGGCG GGGTTGCCCA ACCAAAACAC CCTCAGCCCA ATTCCTCCCA 240
CAGGCCTCCT GGAACCCGCA TTTCTTCAGT GGAGTCACAG CTTTTTGGGC TATGGCTCCT 300
CTTTTCAGTT CTTTTTCTTT ATAACACAAA GACACCATGA GAGAGGCCGT ACTTCACAAT 360
CCCCAAGTGT TAGAAGGCAG AGGGTCTTCC AGACAGCCAC CACCAGGCCT GTGCTTTACA 420
GAGGAGGAAG CTGAAAGGAC TGGTCCAAGA CCACACAGCG GGGAGCAGGT GGCAGCACGG 480
ACGCTCGAAG CTTGGTCTCT CGCTGTGGAG TTTTCTCTCG CCTGTCTCTA CCGCTATCAT 540
CCTAATACTG AAGCATCAGG TCCTTTTTCA AGACACCACC AGCTACAAGC AGAGGGCAAG 600
CCTGGGGCTG AGAAGCACTG TGGGGAGGAG GGGTGGAGCT GGGAGAGGGT CACGGGAGTC 660
AGGGGCCAGG GAAAGCTGCC AAGCAGAGAC AGCCTCTCCT GCCCCTTTCC CAGGGCTGAC 720
TCAGCACCTT ACGCGTGAGG ATTTGTCATC AACAACTGAC CCCAAAAGCC ATGGTGCCCT 780
GGGGTTGGTG TCCCAGTGAT GCTTTTCTGA CTCGTGGCCC AGGATGACAC AAAGCCCCAA 840
GGGACAAGCC AGAGATCCCA CTGGCCCAGC CAGATGCTCC AAGATTCCTT TTGCCTGTAA 900
CCCAGAACTG GCCCACCCTC TTGCCTGGTT ACTGGGGCTT TCACGAAAGA GCAATGGACA 960
GTGGGAAGGG CTCGCTGTGA GGCAGGATCA GTCCTGGGGC CCTGGGAGTG TCTCTTCCCT 1020
TCCCCGAGCC TCAGTGTTCT TGTCTGTACA ATGGAAGTTC AGGTCAGATG GTCTCTGGAT 1080
TCCTTCCCAG CTCTGAGAAC CAGGTTCTAC CTCAGCTGTT CTCAGAAAGG ACAGGGTGGT 1140
CCGGGCTGGG CATGGGCTTG AGGCTTGTGC CCCTCTCCTA GCCCCAAGGA CTTCCCATCC 1200
TTTCAGGTCC CGCTGGGGCT CAGCTGCCCA ACTCTGATCA GAAAGAAGAG CTGTAAGTCT 1260
GGCTGGGCGG TGGCTCATGC CTCTAATCCC AGCACTTTGG GAGGCCAAAG AGGATGGACT 1320
GCTTGAGCCC AGGAGTTCGG GACCAGCCTG GGTAATGTGG CGAAACCCTG TCTCTACAAA 1380
AAATACAAAA ATTAGCCAGA TGTGGTGATG TGCGGCTGTA GTCCCAGCTA CTCAGGAGGC 1440
TGAGGTGGGA GGATCACTTG AGGCCAGGAG 1470
|
