Tag | Content |
---|
EnhancerAtlas ID | HS178-11846 |
Organism | Homo sapiens |
Tissue/cell | Skeletal_muscle |
Coordinate | chr19:3429270-3431030 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr19:3429671-3429690 | TGCTGCCCCCTGGGGGCCG | - | 6.5 | IRF1 | MA0050.2 | chr19:3430944-3430965 | GAAAAGAAAAAGAAAGAAAGA | - | 6.48 | Nr2f6(var.2) | MA0728.1 | chr19:3430440-3430455 | CGAACTCTTGACCTT | - | 6.06 | Znf423 | MA0116.1 | chr19:3429674-3429689 | TGCCCCCTGGGGGCC | - | 6.13 |
|
| Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
SE_00856 | chr19:3429383-3430874 | Adrenal_Gland | SE_05799 | chr19:3426090-3431100 | Brain_Hippocampus_Middle | SE_06831 | chr19:3426835-3431011 | Brain_Hippocampus_Middle_150 | SE_26532 | chr19:3428134-3435912 | Esophagus | SE_31377 | chr19:3428126-3430887 | Gastric | SE_38681 | chr19:3427777-3429622 | HUVEC | SE_40606 | chr19:3428061-3431119 | Left_Ventricle | SE_42110 | chr19:3428076-3431089 | Lung | SE_48051 | chr19:3427132-3431362 | Psoas_Muscle | SE_48561 | chr19:3428078-3430978 | Right_Atrium | SE_51098 | chr19:3427963-3430622 | Skeletal_Muscle | SE_53320 | chr19:3428000-3430939 | Spleen | SE_65251 | chr19:3427859-3430462 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I003427 | chr19 | 3427600 | 3430997 |
|
Enhancer Sequence | CACACACACA CACACACACA CACTAGCCAA ACACGGAGGT GCATGCCTGT AATCCCAGCT 60 ACTTGGGAGG CTGAGGTGGG AGGATCGCCT GAGCCCAGGA GTTTGAGACC AGCCTGGGTA 120 ACATAGCAAG ACCCTATCTC TACAAAAAGT AATAATAATA ATACAAAAAT TAGCCAAGGG 180 TGGTGATGCG TGCCTGTAGT CCCAGCTACT TGGGAGGCTG AGGCAGGAGC ATCACTTCAG 240 CCCAGGAGTT CGAGGCTGCA GTGAGCTATG ATTGCACCGC TGCACTCGAG CCTGGGCAAC 300 AGAGCAAAAT TCTGTCTCTA AAAAAGAAAG ATTGTAACAG GGGGACTGGC GGGGGTTTGG 360 GTCTGCAGAA CTGGACACAG CCCTGAGCTC CCTGCAGTCC GTGCTGCCCC CTGGGGGCCG 420 GGAGAGGAAC TGCTCCCACC GCCACCCAAA AGCCAAGAGC CTGTCCCACC TCCAAACCTA 480 CCAGGCTCCC TGGCTCTTTC CACTCCAACC CTGCTGGCCT GCAACTTGCC AAGTGCATTT 540 CTACCCGGAG GCCTTTGCAC GGGCTGTTCC CAGTGCCGGG AACATCGTGG CCCTCAGGGA 600 GGTGATGAAA CATCATCCCC ATCGGAGAAG CCAACAGTCA CGGGGCGGTT GCCAGGCGCT 660 GTTCTCGGAG CTTTGCAGAT TTTAACAAGT TCCTTCCTCT TATCCAGTCT CATCTTGAGG 720 TCTGTAAAAT GCCACCATCT CGGTCAGGCT TTCTCTGAGC CCTGGGTGTA AAATAGCCTC 780 CCTCCCCACC CTAGCTAGTT CCCCACCAGC CGCCTGCCTT ACCACAGGCT GATGCACCTC 840 GCATTTGACT TAATGAGCTT TTAATTTGTA GTAAAATGTG CATGATGTAC AATGCATCAT 900 TTTAGCCATT TTTAAGTGTC CAAGTCAAAG TGCACTAAGT ACATTCACCT CTATCTAATT 960 CCAGAACCTT TCTTTTTTTT TTTTTTTACC CCCAGGCTGG AGTGCAGTGG CGCAATCTCG 1020 GCTCACTGCA ACCTCCACCT TCCTGGTTCA AGCAATTCTC ATGGCTCAGC CTCCCAAGTA 1080 GCTGGGATCA TAGGCACATG CCACCACACC CGGCTAATTT TTTGTATTTT CAGTAGAGAT 1140 GGAGTTTCAC CATGTTGGCC AGGCTGGTCT CGAACTCTTG ACCTTAAGTG ATTCTCTTGC 1200 CTCAGCCTTC CAAAGTGCTG GGATTACAGA TGTGAGCCGC CGAGCCTGGC CTAATTCCAG 1260 AACATTTCAT CCCCCCTAAA AGAAACCCCA TCCCCATCAG CCACCACTCC CTGTCTCCTC 1320 TCCCAGCCCT GGTGCCCACG CATCCCCTTC TTGTCTCTGT GGCTTGGCCT GTCCTGGACA 1380 TTTCAGTGAA ATGGCTCATG CCTGTAATCC CAGCACTTTG GGAGGCCAAG GTGGGTGGAT 1440 CATGTGGTCA GGAGTTCGAG ACCAGCCGGA CCAAGATGGT GAAACCCCGT CTCTATTAAA 1500 AATCCAAAAT TTAGACAGGC ACTGTGGCAG GTACTTGTAA TCCCAGCTAC TTGGGAGGCT 1560 GAGACAGGAG AATCGCTTGA ACCTGGGAGG CATAGGTTGC AGTGAGCCAA GATTGCGCCA 1620 CTGCACTCCA GCCTGGGCGA CAGAGTGAGA CTCCGTCTCA AAAAAAAAAA AAAAGAAAAG 1680 AAAAAGAAAG AAAGAAATGG CATCACACAC TGTGTGGCCT TTTGTCTCTG GTGTCCCTCA 1740 CTGAATGATG TCCTCAAGGT 1760
|