Tag | Content |
---|
EnhancerAtlas ID | HS178-11384 |
Organism | Homo sapiens |
Tissue/cell | Skeletal_muscle |
Coordinate | chr18:12012210-12013920 |
Target genes | |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
GATA2 | MA0036.3 | chr18:12012611-12012622 | TTCTTATCTTC | + | 6.02 |
|
| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_23131 | chr18:12010209-12013391 | Colon_Crypt_1 | SE_23828 | chr18:12010278-12012670 | Colon_Crypt_2 | SE_23828 | chr18:12012983-12013330 | Colon_Crypt_2 | SE_25040 | chr18:12010253-12012741 | Colon_Crypt_3 | SE_25040 | chr18:12013400-12013996 | Colon_Crypt_3 | SE_26608 | chr18:12008398-12013938 | Esophagus | SE_31757 | chr18:12007685-12014005 | Gastric | SE_47528 | chr18:12010213-12013942 | Pancreas | SE_48386 | chr18:12010207-12016578 | Psoas_Muscle | SE_50470 | chr18:12010158-12013169 | Sigmoid_Colon | SE_65647 | chr18:12004952-12013930 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH18I012007 | chr18 | 12007851 | 12014370 |
|
Enhancer Sequence | AGAGGTGCGG GTGTGGCCCA GGTCCCCAGG GCCCCTCCCT GGGCTCCCTC TGGCCATCCT 60 TCCTTTCTGG CTTCAGCCTC TGTGCGCCTG GTTTGCTGTT TGCCCTGTGC CTTAATCATG 120 ACTGGCAAAT CCAAGCCTGT GGGTTTCAAA TCCGAGAAAA TAAACAAGTC CAGACTGGCT 180 TTGGGGTGTG CGGGGTGGGG CTCCGTGGCT GGCCCTTGTC CCCCGTGGAG GGCTGGCCTC 240 GTGTCAACCG TGGTCTATTT GTGACACTGC TGTGGAAGCG GAAGTCTTAA GTGAACGGTC 300 CAAGTGCATC TCCAGCTGAC CCCTAGAGCG TGTGATCTCA CAAACTAAAA GGAGCACTTA 360 GTTTTGGAGA GCATCCTCAA TCCCAATATT CTAATAATTC TTTCTTATCT TCCTCTGGTT 420 ATTAGCATGA GAACATAGCT CTTTCATGGT TCCCATAGAC CTTCTGAACT ACACAGTGTT 480 GTGCGACCTG CATGGAAGGC GTGGGGCTGA GGTTTAAAGC TTATTAAATA ATTCAAGCAG 540 CAGCACTGAG AAGAGCCTTA ATTTCTTTCT AATTGAAACA GTTTTATTTA AATAGGGCCG 600 AGGGCTGCAT GTTTCTCAAA AGCAGCCCTG CTTCAGAGCA GCATTTGTGC AGCTTCACCT 660 TAGTCTCAGC ACAGACTCCC TGGCAGGGGA GCTGAGAGAA GTACTTAAGT TGAAGTATTT 720 AAAGTTAAGT ACTAAAGTAT CTCAAAGTAC TTAAGCTGAA GATAAGTAAG AATTGTAATA 780 CTGTAATTTG TCTAAGGATG CAATGATTGA CGTCTTTCTC TGTTAAATAA TATTGTGGTG 840 CCCAGAGTGG GTGGGAGGCT GAGCAGTACT TCAGGGGTTG ATTGATGTTC TGTGACTGTG 900 TGAAGGGGCT GCTGGAACAG CTGGCTAGGT CCTTGGCCCT TCTGTGGGTT GGCTAGGGTC 960 TGTCCTATGT TACTACACTG AATACGGGAG CTCCTGGCTT TTCGTGGTGG GCTCCTCCCC 1020 ATGGGAGTGG GGGACATTCC TCTGCACTCT GGGAGCTCTT CACAGGCCTC AGGAACCAGC 1080 CGAATTCTAG GACTGACCTG GTCATGAGGA TTCCTTTAAA GCCAGGGTAC CGGAAGGGGA 1140 AGGATGATGA AATGCTGCCA GACACCTGCA GGCTCTGAAA AAGCGTTGAC TGAATGACGC 1200 CTCCAACCGC CAGAAATAAA CCCTTTCTCT GTAGCTTGGG GTGTCCACTC TAGGGTGTTT 1260 GTGCTCACCC CAGGGCCAGC CAAGGCTTTC CTAAGGCATT TGGCCAGGGT GTTTTTTTAA 1320 TTTTCCAGAG AGGTGAACAC TTGGCTAACT TGCTAAGCAA GCATGCTGGC CCTTGTTAAC 1380 CCTGAGTGGT GAAAAGTCGG TAGAGGAAAG ATCACAGAGG CACGCGGCCG TGGGCTGCCG 1440 TCCTTTTCCA CGCTGACCTC TTCCTTTTGC TGCTTCATCC TGGGAGGCTG TGGTCTGATG 1500 CTTTGTTCCC TGATGTGGGG CAGTCGGGCC ACTGTTCAGC GCACTGCCTG CTCACGGATC 1560 AGTCCCCAGT CTGCGGCGGT GCCTCTTCCT CGCTGGGGCT GTCCTTGGGC TTCTGAGATT 1620 CCGCTGGCTT TACAGATGCA TTCTCCATTC TTCACACATC AGCAATTTTG AGGATTTCTT 1680 GTGGGGTTTG GTTAGAGTCA CAAGTAACAT 1710
|