| Tag | Content |
|---|
EnhancerAtlas ID | HS178-10936 |
Organism | Homo sapiens |
Tissue/cell | Skeletal_muscle |
Coordinate | chr17:72413160-72414780 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| HNF1A | MA0046.2 | chr17:72413462-72413477 | AGTTAATATTTAACT | + | 6.05 | | HNF1A | MA0046.2 | chr17:72413462-72413477 | AGTTAATATTTAACT | - | 6.31 |
|
| | Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
| SE_23242 | chr17:72413517-72414271 | Colon_Crypt_1 | | SE_24858 | chr17:72413504-72414296 | Colon_Crypt_3 | | SE_30767 | chr17:72413292-72414848 | Fetal_Muscle | | SE_31382 | chr17:72412737-72414795 | Gastric | | SE_34414 | chr17:72412444-72414804 | HCT-116 | | SE_47534 | chr17:72413564-72413962 | Pancreas | | SE_48116 | chr17:72412807-72414968 | Psoas_Muscle | | SE_50258 | chr17:72412580-72414402 | Sigmoid_Colon | | SE_51213 | chr17:72413056-72414828 | Skeletal_Muscle | | SE_65359 | chr17:72413531-72414330 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I074417 | chr17 | 72412819 | 72414721 |
|
Enhancer Sequence | TATGGCAGCT TATCCCTGTA ATTCCGGCAC TTTGGGAGGC CGAGGTGGGT GGATCGCTTG 60
AGGCAGGGAG TTGGAGATCA GCTTGGCCAA CATGGCGAAA CCCTGTCTCT AATAAAAATA 120
CAAAAATTAG CCAGGCCTGG TGGCTCACAC CTGTAGTCCA GCTACTTGGG AGGCTAAGGC 180
AAGAGAATCA CTTGAACCCA GGAGACAGAG GTTGAGTGAG CCGCTGCACT CCAGCCTGGG 240
CAACACAGTG AGACTCTATC TCAAAAAAAC AACAACAAAA AGACTGCTGG GAGGACCAAA 300
GGAGTTAATA TTTAACTTCT AATGGTCCCT GTGGCATAGT AAATGTGAGT CATTATAATT 360
TGCATGGGTG ACTAAGAAGC TCAAAAGAGG CGAAAAGACA ACTCCAGGGC AACACAGCCC 420
GTGACTCATT GGTCAGGCTG AGTCCTGAAC CTGGGTCTCC TGGCTCCCTG CACAGTGCTC 480
ATGGTTCAAC TGAAACCTGG AACTAGAATG GCCAGTGAAA TCCGATGCTC TGTGTGACTG 540
TAACTTCTGT TATTCCCTCC TGTGTGGCAG GCTGTTTCAG CAGCCGTGCA CTGTCTCCCA 600
TCCAAGTACT AATCAGGCCC AACCCTGCTT AGCTTCCTAG ATGAGACGAG ATCGGGTGCG 660
TTCAGGGTGG TATGGCTGTA GACGCAGCCA TGCACTGTCA ACAGCTGGCT ATGCACCTGT 720
GCTGGGGTGG GGAGGGCAGC CAGTTGGGTC AGACTGTGGC TCTGTGCCTG ACCCTGAGAA 780
GAGAGAGCCC TTGGTCCCTG CAGGAGGGGT GTTAGGAAGG TGCGCTAGGG CAGGCAGACA 840
GCAGACTGCA TAGCGTCTGA GAGGGGCTTT TCTGGATCAC ATTTCATTGC CAGAGCAGCT 900
CCAAGGACAG GGAAGGCACC GAGCTGCTGC TTGTAGCCCT GGTTAGGAAA TGGCCAGGAG 960
AGCAGGACAA CTGTTTTGAA AGGCAATATG ACATTAGGGC AAAAGGGCTG CTGGGAATAA 1020
ATCCCTGCTG CACAGGCTGC TTTAGTTTAA GCCGACCAAA ATGACCTAGG ACAGGCCAGG 1080
CGTGGGTGCT CATGCCTGTA ATCCCAGCAC TTTGGGAGGC CGATGTGGGT GGATCACCTG 1140
AGGTCAGGAG TTCGAGACCA GCCTGGCTAG CATGGCGAAA CCCCATCTCT ACTAAAAATA 1200
TCAAAATTAG CTGCCCGTGG TGGCGGGCAC CTGGAATTCT AGCTACTTGG GAGGCTGAGG 1260
CAGGAGAATC ACTTGAACCT GGGAGGCGGA GGTTGTAGTG AACTGAGATC CCACCACTGC 1320
ACTCCAGCCT GGGCGACAGA GCGAGACTTC ATCTCAAAAA CCAAAAACCC CAAAATGACT 1380
TATGACAAGC GGAGGCCCGG GAGCCACAGT TCCCCTGGAA GGTCTACTCC CTTCTTTCTT 1440
CTAAGTCTGT GGCTTCTGCC CCACATCTGA GAACAAAAAG CAGTGAATGG CCAGAGTGAT 1500
GCAAAGAAAA AAGAGCAGAA ACAAGACAAG CTAGTGGCCT GTGCAATTCA CCTTTGAATG 1560
GGCAATATTC TCTATGAAAA TTGGATGCAA AGAACCTCCA GGTGTGCTTG TAGCTTTCTA 1620
|
