Tag | Content |
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EnhancerAtlas ID | HS178-10739 |
Organism | Homo sapiens |
Tissue/cell | Skeletal_muscle |
Coordinate | chr17:55956070-55956970 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr2f6(var.2) | MA0728.1 | chr17:55956246-55956261 | TGAACTACTGACCTC | - | 6.07 | RARA | MA0729.1 | chr17:55956243-55956261 | TCTTGAACTACTGACCTC | - | 6.1 |
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| Number of super-enhancer constituents: 33 | ID | Coordinate | Tissue/cell |
SE_01614 | chr17:55956811-55960112 | Aorta | SE_03878 | chr17:55956245-55959769 | Brain_Anterior_Caudate | SE_04783 | chr17:55956096-55961004 | Brain_Cingulate_Gyrus | SE_06590 | chr17:55943471-55960413 | Brain_Hippocampus_Middle | SE_07738 | chr17:55949624-55958078 | Brain_Inferior_Temporal_Lobe | SE_25794 | chr17:55954886-55959515 | Duodenum_Smooth_Muscle | SE_27772 | chr17:55956423-55959989 | Fetal_Intestine | SE_28796 | chr17:55956222-55960267 | Fetal_Intestine_Large | SE_29569 | chr17:55956183-55960712 | Fetal_Muscle | SE_31404 | chr17:55956470-55957264 | Gastric | SE_33448 | chr17:55950667-55958164 | H2171 | SE_34179 | chr17:55956198-55957251 | HCC1954 | SE_34254 | chr17:55956128-55959730 | HCT-116 | SE_35331 | chr17:55956169-55958233 | HepG2 | SE_37539 | chr17:55955227-55958306 | HSMMtube | SE_38977 | chr17:55956158-55960130 | IMR90 | SE_40601 | chr17:55956187-55959902 | Left_Ventricle | SE_42102 | chr17:55956229-55960103 | Lung | SE_44235 | chr17:55955071-55959711 | NHDF-Ad | SE_44887 | chr17:55956016-55959576 | NHLF | SE_46579 | chr17:55955153-55959649 | Osteoblasts | SE_47384 | chr17:55950105-55960103 | Panc1 | SE_48056 | chr17:55955055-55960204 | Psoas_Muscle | SE_51111 | chr17:55956084-55960134 | Skeletal_Muscle | SE_52082 | chr17:55956033-55957874 | Skeletal_Muscle_Myoblast | SE_52598 | chr17:55956285-55957177 | Small_Intestine | SE_54487 | chr17:55956104-55960313 | Stomach_Smooth_Muscle | SE_56380 | chr17:55955156-55957753 | u87 | SE_63290 | chr17:55922884-55976538 | NCI-H82 | SE_63875 | chr17:55955581-55957945 | HSMM | SE_65273 | chr17:55955619-55956425 | Pancreatic_islets | SE_65273 | chr17:55956549-55957557 | Pancreatic_islets | SE_67933 | chr17:55955156-55957753 | u87 |
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| Number: 1 | ID | Chromosome | Start | End |
GH17I057877 | chr17 | 55955267 | 55960716 |
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Enhancer Sequence | AGGCTGGAGT GCAGTGGCAC CATCTTGGCT CACTGCAACC TCCGCCTCCG GGGTTCAAGC 60 GGTTCTCCTG CCTCAGCCTC CCAAGTAGAT GGAATTACAG GCATGCGCCA CCACCCCTGG 120 CTAATCTTTG TATTTTTAGT AGAGATGGGG TTTCACCATG TTGGCCAGAC TGGTCTTGAA 180 CTACTGACCT CAAGTGATCC ACCCACCTTG GCCTCCCAAA GTGCTGGGAT TACAGATGTG 240 AGCCACTGTG CCCAGCCTAG CTTCATTTTA AGCTTCCAAA TTACAGAGTC TCTAACCTGG 300 AAGAAGTTTC CAGGGACCTT GCAGTCTACC TCCCTGCCTC CAGTTATCAA ACTACCTTAA 360 TGAAAGAGAC TTGCTCTCAT TGCTTAAAAA TCCTCACAAT ATCCCTAGCC CAAGGATGGC 420 AGCTAGCCAT TCCATCAATT ACTGATGACT GGCTGGGAAT GCTGTGTTCT GTGTTAAGGA 480 GGATCTGAGG CTCTGTCTTG ACTCAGCAGG AAAGAGCACA GTGATGAATC AGCCATGTTT 540 GCTGTGGGCT TGGGAGGGGA AGTGCCAATA CACATTCCCT GTTTGTCATT CCTACTCTGG 600 CATCTCCCTT GACTATAAGC TCCCAGAAAG CAGAGGCTGA GCTTTACTTA ACTCTGTGTC 660 CCATATGGTA CCAGACATAC CGCCTAGCCT AGAGTAGGAA TTTAGGAAAT GTTTGCTCTT 720 GCAATCCTTA CATTTTGCAA GTTCTCCTTG GTATCTAGCT AAAATGTCTC TTGCTGCAGT 780 AGAAGCCTGT TCTTTGAAAT ATACTGAGCA GTCCAGCCAA GTTTCGTGTT GTTTGTACAC 840 AGCCCCAGCC ACTGATCCTC TTCCCTGCCA CCCTGTGCTC TGAGACATGA CAGATTCTCA 900
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