Tag | Content |
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EnhancerAtlas ID | HS178-10207 |
Organism | Homo sapiens |
Tissue/cell | Skeletal_muscle |
Coordinate | chr17:27438880-27441020 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RARA(var.2) | MA0730.1 | chr17:27439396-27439413 | GGGTCACTCAAGGGCCA | + | 6.03 | YY2 | MA0748.1 | chr17:27440373-27440384 | TAATGGCGGAC | - | 6.62 |
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| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_03910 | chr17:27438020-27442242 | Brain_Anterior_Caudate | SE_04884 | chr17:27438512-27441743 | Brain_Cingulate_Gyrus | SE_05843 | chr17:27438017-27445637 | Brain_Hippocampus_Middle | SE_07806 | chr17:27437991-27441998 | Brain_Inferior_Temporal_Lobe | SE_09987 | chr17:27440483-27444430 | CD14 | SE_37582 | chr17:27437919-27441221 | HSMMtube | SE_41080 | chr17:27438051-27440459 | Left_Ventricle | SE_48211 | chr17:27437653-27443740 | Psoas_Muscle | SE_51291 | chr17:27437370-27442923 | Skeletal_Muscle | SE_65361 | chr17:27436292-27440353 | Pancreatic_islets | SE_68762 | chr17:27438166-27441377 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr17 | 27440078 | 27440170 | chr17 | 27440855 | 27440941 | chr17 | 27440434 | 27440688 | chr17 | 27439636 | 27440351 |
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| Number: 1 | ID | Chromosome | Start | End |
GH17I029111 | chr17 | 27438402 | 27440980 |
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Enhancer Sequence | CCTACAGAGA AGGAAGGAAA TCCCTCCTTG TCATATGGAG CTGTGGGAAA GGGGCCAGGG 60 TGGTGCCGGG CCCAAACACA CCCTACAGAA TGCTACACAT GTGCACACAT GCACACACGC 120 ACATGCCGCA GCTCCTGCCG CTCACTGCTG ACACCTTGTG GAGGAAGCGG GCAGCCCGGG 180 GAAAGGGGAG CCAAGAAAGT GAGCAGAGGG AAGCCCACAG CAAAAGAGGG TGCTTAGCAC 240 TCCAGTCCAA AGTCACCAAA GACTGCAGCC TTCCTGCTGG CCCGAGCCCG CGCCCCGAGG 300 CCCTCCTCCA CCCTCGTCCC CTCGGAGGTC ACCAGGGACT TGGATGAACC CCACATTGCT 360 CTCACTCCCT GGCAGTGGCA TAAAGTCTGG AAGGCCCTGA GCACAAGAGT TGGCCCTAAG 420 GAAGCTGTCA GTAAGTGACA GCTGTGAGGT TAATCCTGGT CTCTGAAAGG AGAGAACCCA 480 GAGGGGGCTC AGATGGCTGC CAGTGGGATC ACTGCAGGGT CACTCAAGGG CCAAAAGCAT 540 AAGACAGGTG ACTTAACGGA CGTGGCAGCC AAAACGGGTA GAGGCTGGGG CAAGCTAGAG 600 AGCAGGTATC CCTATCCAAA GGGAAAAACC ACCACTGAGC TGCAGCTAGC TGCTCTCCTG 660 GAAGAACACT GGCCTAGCAT TGATAAACCC TCTGGTTCTT CAAGAGAAGG TAGAAATATC 720 TAATTCTAAT TTCCAATATC CCATGAAGGC CAAACAAACT AGGCCTGTGG CCACATCTGG 780 CCTGAAGGTG CCTTTTCTGT GGAGTTCCTG CATCTTTCTT GGGCAGGAAG GATGGAACCT 840 TCCCCACACC CTATTCTGGC CTGGCCTTCA GGGGCTGGAG GAAAAAAGAA GTGAGAAAAG 900 GGCCATTTTT CCTCTCTTTG ACCCCAGCTG CCTGCATCTC CTCCCCGCAG ATGCCCAAGG 960 GAGTTGGCGT GATTACCAGA AGGAAGCAGA ATGTGGCCAA AGGCCAAGGC AACTCTAGTG 1020 GCAGGAACCG AGTAGCAGGA ACGAGCAATG AAGCAATGAG ATGGGAAGAC AGGCTTGGCA 1080 CCGAGGGCCC CTTCCCCAGG GGTGCAGCCG CCCCATGCCA AGGTCCATTA GTCAGGAGAG 1140 ACCACAGAAG AGAAAGGAGA GCCAAGCTCT TCCCACATGC TGTCTGACTC CTGCTGCTCA 1200 TGCTGACATC CCCCCTCTCC CGGGAACCAC AACGGTTCTG AGTGAGGCCA CCATAGGAGC 1260 CCAGGTGTCA GGAAAAGAAA ATTCACTTCC CTGGGGAGAT GCGGTGCTTG GGCACTTTAA 1320 ACATCTGTCC CCGGGGGGAT ACTCACTCTT TCGCAGCCCC ACCACTTGTG CAAGCCAAGC 1380 AGGGCCTCAT GGCAGAGAAG AGGGAGGGAG AGGTAGGGAT CAAAGCAGAG CAGGGAGGTC 1440 GGCAGCCTCG CAAAAATGCC AGTTCTCCAA TAAAGCACCT TATGCAATTT CCCTAATGGC 1500 GGACAATCGC CAAATGCCAA GAGTTTGCTA GGCCAGCCAG TCCCCCACCG AGTGCCAAGG 1560 TGCCCAGGAC ACTAGCACAA AGGGTGACAA AGCCTGCCCC CAAAGTTGAG GGGTGAGGGT 1620 TCATATCCAT GACAGTCCCC CAGAGGGCGT CTGACAGCTT AGCACTGTTT CCCCTGGGAG 1680 CGGGAGGCTG GCTCCTGGCC CTGTTCTGTT AGGTTGCACC AGTCCTCTAC TTGGGGACAA 1740 TGGGAGGGAA TGACTATGTC CTTGGGGTCT AGGCCCTCAC CAGCTGGGAC TGGTCACCAG 1800 GGCTCCTAGC AGACATACTG GAGGCTCAGC CAGTCACCAG CTGGGGCCCG AGCCTCAGCT 1860 GCTGAGAAAG GAGATATGCT TTCCTGCCTG ACTGGGACCC CCATGGGCTG TGGCTCCCCA 1920 GGGCACCAGG GCAGAAGAAA GTGCCACCTT CCTGGCCAAG ACTGCCTGAG TGCTGAGGGG 1980 CAGAGCCCCA GCACCAGAGA GTAGTTGGTG TCTGGGCATA GCTGCTGGAC CCTCCCTCAG 2040 CCCACAGTGG CACCCCCAGC AGCAGCTCAG ATGGGGAGGG CTCCACCACG GGGAGAGGGG 2100 TGGGGAACGA GAGGAAAGGC TTGCCCAAAC CCTCTCTGGA 2140
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