Tag | Content |
---|
EnhancerAtlas ID | HS178-05938 |
Organism | Homo sapiens |
Tissue/cell | Skeletal_muscle |
Coordinate | chr12:89738380-89741550 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr12:89740527-89740548 | AAAAAGAAAGAGAAAAGAAAT | - | 6.07 | IRF1 | MA0050.2 | chr12:89740521-89740542 | AGAAAGAAAAAGAAAGAGAAA | - | 6.27 | RFX5 | MA0510.2 | chr12:89739671-89739687 | GGTTGCCCTAGTAACC | + | 6.25 | SPIC | MA0687.1 | chr12:89740280-89740294 | TACTTCCCCTTTGT | - | 6.47 | SPIC | MA0687.1 | chr12:89741405-89741419 | TACTTCCTCTTTGG | - | 6.51 |
|
| Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
SE_00690 | chr12:89736686-89749897 | Adipose_Nuclei | SE_25495 | chr12:89737202-89749426 | DND41 | SE_26301 | chr12:89738766-89749678 | Duodenum_Smooth_Muscle | SE_27644 | chr12:89739368-89741580 | Fetal_Intestine | SE_28566 | chr12:89739453-89741345 | Fetal_Intestine_Large | SE_30143 | chr12:89738982-89742175 | Fetal_Muscle | SE_31980 | chr12:89739391-89740790 | Gastric | SE_34489 | chr12:89739228-89741819 | HCT-116 | SE_35929 | chr12:89740392-89750597 | HMEC | SE_38477 | chr12:89738992-89749161 | HUVEC | SE_41177 | chr12:89739166-89741735 | Left_Ventricle | SE_42423 | chr12:89739274-89741688 | Lung | SE_43823 | chr12:89737701-89749582 | MM1S | SE_45220 | chr12:89740269-89741084 | NHLF | SE_48925 | chr12:89739317-89741128 | Right_Atrium | SE_50215 | chr12:89739271-89741701 | Sigmoid_Colon | SE_52692 | chr12:89739104-89741673 | Small_Intestine | SE_53425 | chr12:89738103-89741838 | Spleen | SE_57109 | chr12:89739987-89741122 | VACO_400 | SE_57109 | chr12:89741142-89741558 | VACO_400 | SE_67349 | chr12:89737701-89749582 | MM1S | SE_67873 | chr12:89740020-89749518 | u87 | SE_68915 | chr12:89739205-89740987 | H9 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr12 | 89739194 | 89741546 | chr12 | 89740084 | 89740418 | chr12 | 89740427 | 89740813 |
|
Enhancer Sequence | GCTGGTCAGT TTACCTCTCT TCTTCTGTAG ACCTGCACCA TATATATGTC TTCTGCCTCT 60 CCTCCTTGCT TCTTCACACC CTTCCCCTTT CCCCTGACCC ACCTCCCTCT CCCAGTTTGC 120 CTCTAGGAGG GATAAGAGTG AGGAAGTGAA CTTCTTTGGG GCCAGTTTAG TTGTGTCATC 180 CTGAAAGGGG AGTATGGGCA AGGGTCAGGG TCAGGCCCTA TGCTAGCTGG TAGCCATTTT 240 AGAGATACTT AGGAAAAGTA GTTTTATAAT TTAAGTGCCA ATGGGACCAA GGAAGAGCAA 300 CTTCTCTGCG GAGAAGGAGG ATGGAAGTTT ACCCCCGGTG GACACCTCTC TGACAGCACA 360 CCAGCTGGGG CCTCCCATGT GGCTGTGGAA TTCACATGGA ATTTGGCTAG TCATTTAACC 420 TCTGCTTCCT CCACTTCCTC AGCTGTATAA TGGGGACAGC ATTTCCTAGC CGACATCATG 480 AGACTTTATA AAGGGGAGCA AATACTGATG ACAAGCAGTT TCCAACAGGA AGAGCCAAAG 540 GCTCAAGGTT CAGTTCTGCA GTAACAAGCA CTGGATATGC AAACCTTCTC TAACATTATG 600 TGTCAGGTGT CCCATAAAGG TGGCTTTAGG CTTTATTGGC CTTTCTCTGC CTCAGTTTCC 660 TCTTTGCAAA ATAAAGATAA TAATAGGACC TATCTCACAG AGCTGTTTTG AAGATTAAAT 720 GAGATACAAA GTATAGTATC TGGTACTCAT GATAAATGTT AGTTATTTGT TTCACCTGCT 780 CCGCACCTCA TTTTATCATG TAATAAGTGT CACCAATCCA TGAACAGAAG CTGGAATTAT 840 GAGAGAATCC TAGAATGGGA GGTAAAAACT CCCTCATTTT TACAGACAAG AAAAAAGAAA 900 TGCGGTAAGA TTGGGTGCCC TGCCCAGGGC TACCTGATTC ATTAGCAAGA AAGCAGCAGC 960 TACAGTTCAG GTCTCCTAAT TGTCAAGGTT GGTGCAAGTC TCAGTTTTCA TTCCTTTGAA 1020 GACTGTGTTG GTATTTTTAT CCCCAGATAA CCCTTTTTCA TTCCTATTTT AACGCTAAGA 1080 CCAGTTCATA CTATTAACCA CTGCAATCTC TGTCTCCTGC AGCTCCCAGG AAACCTGCTG 1140 ATAACCTCCC CTTCCCAAAA GCCATACCCC ACCCTACCCC CCTGCCCCTG CAAAAGGCCA 1200 GGAAAGGTAG CGCTTTCTCA GAGACCTGAG GAAGCTACTA ATGGGGACAG CAGGTGAGGA 1260 AGGAGGCGGT GGAACTGCAG CTGCTGGCAA AGGTTGCCCT AGTAACCGTG CGGGCTCCAT 1320 TCAGGAAGCC AGCCCAACTC CAAGATGCAA AATGATCGCC TTCACGCGGC TACTGCAAGC 1380 ACAAAGGAAC CAGAGGAGCC CTGATATAGC TGGAAGAAAG GGAGGCACAG AGAGAGGTGG 1440 GGGCCCATGC TGTCAGTTAC AACCTTCCAC CTTCCACAGA AGAAAAAGAA GGAAAGAGAA 1500 TAGCTCTTTG AATCTTCTGG CCTATGTGAA CCGTAAAAAC CACCCATTTA ACATGAGTCC 1560 TTTGGTGAGA ATAGAGGGAA ACAGGCACCC CTCTGTTCAC CAGCCTTCTG AAACAATATG 1620 TCAGGAGAAG GGGGAGAAAC CTCAAACATT GCAACTTTAT GGAGGCTCTA AGCTCTTCAT 1680 ACTCTCTCTC TCCTTTATTC AGACTGGTGA CAAAGACCAT TTGCTCCCAA TTTATTGGAA 1740 ACTTTTTTTT TTTTCACAGC TTGAGCTGCT TAGATGCAGC GAGCTCCCTC TCCCCAAATT 1800 GCAGTCAGAC ACTTGCTGAA TGGGCCAGGC TCAATTATGC TCCCTCCACA GGTTCAGCTC 1860 ACACTGTGAC CCTGCATGGC TTCCTGCTAT TCATATGTGT TACTTCCCCT TTGTGGTAAT 1920 GGCTTGTGGC ACTTAGCCAG AAAACATTAT TAATTTCAGA AGTGGACTGA CAAACAACAA 1980 ACCCACAGTA AAACGAGAGG AAGTGCTGGG GAGGCCAGCT GTCGGCTTGA GCCAAGCAGT 2040 AGGAACTCAA TGTATGCAGG TTCTAGGAGG AAAGAGATAA TAATCCACAA AGAGGAAATG 2100 CACTAAAATT ATCCACAGCC CATATTTTTT TAAAAAACGA AAGAAAGAAA AAGAAAGAGA 2160 AAAGAAATCA GAGAAAAGAA AGGGGGGAAA AGCACCCAGC TACTTGAGCT GCAGCTGGAC 2220 AGGAAATTGC TAACGCTGCT TGCAAATCCT TACTTTGAAC AGGCAGTTTA GGGAATGCCA 2280 GGAGCGGAAA CCGTTCAGAA CTGGATTAAC ACGAGCCAAG TTGAACTGCA ATCCACTTCT 2340 CCTTTCTGTG CTCTTGCTGA CTTGGGACAC CCAAATAGGA CAGACTGACT TGGTATATAT 2400 ATATATTTGC ACTATTTCTG TTTGCTTTTT ATACTTAGTT GCTTAAAAAT CACCATGGAC 2460 AGTTTTATAT GATTGCCATC GAATGAAGGC CACTTGCCTC CTAAGTTAGT GTAGACGACC 2520 AAGCAGTCAA CTCATGTGCC ATGTAGGTGA AAAGCTCATT CTTCTCCCCA CTTCACATGA 2580 AGGGACTGAG CTCATGCAAA AAGAGCCCCA AATATAAGTA CGTTCTAGTT CTTTTGATTC 2640 CATACACCTG CCTTTTATTT TGGTTTGTGT ATTTTTACAT TTGAGGTAAG GAGAGGGTAG 2700 GTCCCAAGAA AAATGGCAAG ATATAAAGTC TTTAGCTTGA AAAGAAACTA AAATAATCCC 2760 CACAAGTTTC AATAAGGGTT TCTGACCCAC ATCCCAAGCC AGTTAAACAA AAAAGCACAT 2820 TACAACAGGG ATGACAAAGT TGCCTCCTAA GTGCCAATGT AAAATTCTAA AGCCATATCC 2880 TGACACGGTG AGGAAGCTTA GATATGCCTT GCCATGCGCA TGCTAGGGGA AAAAGTGGAG 2940 ACATCATTCT GGATTCAGCA TTCTCACACT AGGATATCTG CAGGTAGAAT TGCCCATGAC 3000 AACAGACTGG AAAAAGAATT ATCCCTACTT CCTCTTTGGC ATTATCTCAG CATTATAAAG 3060 CAGAAGATCC TGACAGTGAA GGATAGGGAG GAGGTTAACA TGTGGCTGTC ATCTTGGTAT 3120 TCTGCTACAC CTCTCTGTGG TTAATATCCA AATTGTATTC CTCAGCAAGC 3170
|