Tag | Content |
---|
EnhancerAtlas ID | HS178-00775 |
Organism | Homo sapiens |
Tissue/cell | Skeletal_muscle |
Coordinate | chr1:32391780-32393600 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CDX2 | MA0465.1 | chr1:32392767-32392778 | AAGCCATAAAA | + | 6.62 | GATA2 | MA0036.3 | chr1:32393268-32393279 | GAAGATAAGAA | - | 6.02 | NKX2-5 | MA0063.2 | chr1:32392945-32392955 | ACCACTTGAG | + | 6.02 | Spz1 | MA0111.1 | chr1:32393251-32393262 | AGGGTAACAGC | + | 6.62 |
|
| Number of super-enhancer constituents: 27 | ID | Coordinate | Tissue/cell |
SE_00185 | chr1:32391603-32393593 | Adipose_Nuclei | SE_05505 | chr1:32391717-32393788 | Brain_Cingulate_Gyrus | SE_09496 | chr1:32391763-32393144 | CD14 | SE_11611 | chr1:32389155-32406399 | CD20 | SE_12303 | chr1:32392707-32393657 | CD3 | SE_13610 | chr1:32391690-32393439 | CD34_Primary_RO01536 | SE_14567 | chr1:32391765-32406526 | CD4_Memory_Primary_7pool | SE_18176 | chr1:32389348-32406796 | CD4p_CD25-_CD45ROp_Memory | SE_18474 | chr1:32389295-32406605 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19618 | chr1:32391540-32392615 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_19618 | chr1:32392961-32393728 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20913 | chr1:32391801-32393763 | CD8_Memory_7pool | SE_22706 | chr1:32386302-32406312 | CD8_primiary | SE_25437 | chr1:32389224-32406301 | DND41 | SE_31027 | chr1:32389104-32406257 | Fetal_Thymus | SE_31788 | chr1:32392847-32393197 | Gastric | SE_32591 | chr1:32391777-32393802 | GM12878 | SE_39509 | chr1:32391790-32393774 | Jurkat | SE_39960 | chr1:32392739-32393526 | K562 | SE_49021 | chr1:32392248-32393416 | Right_Atrium | SE_51637 | chr1:32392055-32393763 | Skeletal_Muscle | SE_52642 | chr1:32392247-32392870 | Small_Intestine | SE_53748 | chr1:32392944-32393411 | Spleen | SE_55181 | chr1:32392262-32393481 | Thymus | SE_59623 | chr1:32331606-32430327 | Ly4 | SE_62431 | chr1:32376082-32428121 | Tonsil | SE_66311 | chr1:32391790-32393774 | Jurkat |
|
Enhancer Sequence | TATCAATCCA CTCACATCAG GATTTCTAAG AAATCATCCC TTTACATTTC CAAATTAAAT 60 GATACAATAA ACCCTCTAAT TTGGTGAGCT ACGCCAGTAT TCACCAAATT AAAACAGCAC 120 ATTAAAATAT AAAGGTACAA TAAAAGAATT CTAGATTTAA GGAAATACAG TCTAAAAGCA 180 AAGGTCTAAA AAAAACGAGT ATGCATATAT TTACTGCTAC TTTTCTTACC AGAAATTTTA 240 CAGGAAGTAA TGCAAATTTG AGTCAGCTTG GTTTCAACAA TCAGTCAACA TGAAAGCCTA 300 ATAATGTAAT ATACAACTAA CACCTTGCAA CATTTTTTTC CTAAAGCAAA TTCCCTTCAT 360 GTCAATAGCC ACTTTTATTT CCCCTTAAAA TAAGTATAAA AAATCTAATC TGTCAACAGT 420 AAAGAATTTA TCCTCCTGAA GAGCTAGGCA TTTTCCTCAA ATTCTTTCAT TAATTCAAAT 480 ATTTACAGAA CATGTACTAT GGGTCACATA CTCTTACAGG TGCAAGAGCA ATAAGCAAAA 540 CAAAAATTTC TGTTGGGATG GATCTTACAC TTTACTGGGC AGAAAAAAAG AAATAAAAAT 600 GTCACTGCTC TGGAGAAAAA TTAGAAGTAG GGGAATTAGC AGTGCCAGAG GGAGGGGGGT 660 TCCAATTTTA AATAAGGCTA ACAGGAAAGG CCTCACTGAA AAAAGTGACT TTTTATCCAA 720 GAGCTGAGAG TGTGAGCCAA ACAGGTATTT GGGGAGCATT TTAGGCAGAG GATTAACTGC 780 TGCAAAGGTT ATGAGGTGGG GACAAGCTTA GAGTATGCTA GGAACAAGGG AACCAATGCT 840 ACTGGAACAG AGAGGACAAT GGAATGAATA GAGTCAGAGA AATAAAAGAG AGCCTTATAG 900 GCCACTAAAA GCATTTGACT TTTATTCAGA AAATGATGCC TCTCCAAATG AAGCCAATGA 960 AGGGTTTCAC TCAAGAGTGA CAACTCAAAG CCATAAAAAA TAATGAAATC ATGTCCTTTG 1020 CAGCAACATG GATGCAGCTG GAGGCCATTA TCCTAAGCGA ATTAACGCAG GAACAGAAAA 1080 CCAAATACCG CATGTTCTCA CTTATAAGTG GGAGCTAAAC ACTGAGTACA CATAGACTCA 1140 AAGAGGGGAA CAACAGACAC TGGGGACCAC TTGAGGGTGG AGGGTGAGAG GAGAGTGGGG 1200 CTTGAAAAAC TACTTATCAG GTACTATGCT TGCTAACTGG TGACGAGGTG ACAAAATCAT 1260 TTGTACGCCA AACCCGAGCG ACATTCAATT TACCCACGTA ACAAACCTGC ACATGTACAC 1320 ACTGAACCTA ACATAAAAGC TGAAAAAGGA GAGAAAAAAA GAGTGATAAC TTAGGTTTTA 1380 CAAAGGATCA CTCTATCTGC TATGTGGAAA CATTACAAAA ATGGTAAGGG TGGAAGCAAG 1440 GAGACAAGTA GATATAATGG TAGCTTAGAC CAGGGTAACA GCAGTAGGGA AGATAAGAAG 1500 GGGTCAGTTT CAAGATACAC TTTGACGTGG GATTTGTCCA CAGACTGGAT ATAGAGTTTA 1560 TGAAAAACAG TCAAGGCTCT GAGTAACTAC AGAACTTGTG GAGTCCAACT TAATATTCAG 1620 AGGCTATTCA GACAATAGAT TGTAAAATCT TCTCAACCAT CAAAGTAGTA GGGAAAGTCC 1680 TCTGTAAAAT GCTACTGTAC CTATTGTATT TTGACCACTT GGGGGAAAAA AGTGTCTGAA 1740 AACTTGTAAA CTAAAAAACC TCACCTTTAA TTAGTAAAGC GTTTAATTAG TAAACACGCA 1800 TCTTCTGATT AACTGGTCTC 1820
|