EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS178-00578

Organism

Homo sapiens

Tissue/cell

Skeletal_muscle

Coordinate

chr1:25046160-25047550

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3

MA0041.1

chr1:25047262-25047274

AAACAAACAAAC

6.32

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_05379	chr1:25045996-25047209	Brain_Cingulate_Gyrus
SE_06312	chr1:25039257-25047436	Brain_Hippocampus_Middle
SE_07165	chr1:25046221-25047136	Brain_Hippocampus_Middle_150
SE_08484	chr1:25039603-25046303	Brain_Inferior_Temporal_Lobe
SE_37045	chr1:25043783-25047854	HSMMtube
SE_41323	chr1:25046211-25047109	Left_Ventricle
SE_41323	chr1:25047115-25047719	Left_Ventricle
SE_52042	chr1:25046220-25047059	Skeletal_Muscle_Myoblast
SE_63833	chr1:25045333-25047073	HSMM

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I024717

chr1

25044258

25047717

Enhancer Sequence

CAAGCAATTC TTCTGCCTTA GCCTCCCGAG TAGCTGGGAT TACAGGCATG TGCCTCCACG 60
CCTGGCTAAT TTTGTATTTT TAGTAGAGAC GGGGTTTTTC CATGTTGGTC AGGCTGGTCT 120
CAAACTCCCG ACCTCAGGTG ATCCGCCCGC CTTGACCTCC CAAAGTGCTG AGATTACAGG 180
CGTGAGCCAC CACCCCCGGC CTTACTCTTC AGCAATCTTG TAGAGAATGA CTATTATTAT 240
CCCCATCGTT ATTTTACAGA TGAGGCAGTT GAGGCAGAGT TAAAGTAACA TGCCTAGGAT 300
TCTAACCCAA GACCTCTGGC TTCAGGGTTC ATCCTCTGGC CTTCTCTGAC CCTGTCCCCT 360
CTATTCAGGA GTTGGGGTAC CCTGAGTACC CACACATCCA CTGGTATCCA TGGCTCATCT 420
CTTGGGATGG GGTTCTCCCA TCCTCTGGGC GAGAGCAGGG GCCGGCTGTG GGATGTGGGG 480
AACCGAGTCA TGGGCCTGGC CTCCAGGAGA CAGTCAGCCA ACACCTGCCA GTCCGCCAAG 540
TCCCAAAACA GCCTGGGCGC AGCTCACATC CGGCTGTTGT TCCGGAGCCA GAGAGGAGAA 600
CAGGAAAGGC CAAGAGGCCT GGCTCCAAGC TGACTCATTG GGAGGTGGGA CCAGGACAGG 660
AAGGGCAAGG GGTCGCCAAC TCCATCCTCC CTCCCTTGGA CACTCACTGG AATAAGGCCG 720
GGCCCTGGAG CCACAGGCCA GAATCCACCC ACCATGGAGC TTCAGGGACC TCACAGACTC 780
CCAGGGAGGA AACACATGTG AGTTTAAAAA CCAAGCCAGG CCGGGCGCGG CGGCTCACGC 840
CTGTAATCCC AGCACTTTGG GAGGCCCAAG GCAGGTGGAT CATGAGGTCA GGAGATTGAG 900
ACCAGCCTGG CCAACCTGGT GAAACCCCAC CTCTACTAAA AATACAAAAA TTATCTGGGC 960
GTGGTGGCGC GTGCCTGTAA TCCCAGCTAC TCGGGAGGCT GAGGTAGGAG AATCACTTGA 1020
ACCAGGGAGT CAGAGGTTGC GGTGAGCGGA GATAGCACCA CTGTGCTCCA GCCTGGGGGA 1080
CAGAGCGACA CTCCGTCTCA GAAAACAAAC AAACACACAA AACCAGGCCA TAGCATTTGG 1140
CTGGAGAGAT GAAGGTTCTG CATGGCCAAA TACTTTGATG ACTTTCTTGG GTGCGAAAGG 1200
CACTGCCCTC TTCCTGGCCG TGGCCTGGAG GACAGGAGAG AGGGCTCTGG GTAAGGAAAT 1260
GGGGCAGGAG GGCAGAAGGC TTGAGACCTG AAAGGCAGCG GGAAGGATGA ATGTAGAGAA 1320
ATCTCAGAGC CTGAAGAAAG AAGCCACCTG CCAAGAGTCC ATGGGGAAGG CTGGCCCAAG 1380
AGAAGTCTCT 1390