| Tag | Content |
|---|
EnhancerAtlas ID | HS177-23536 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr9:38038590-38040000 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| HNF1A | MA0046.2 | chr9:38039258-38039273 | GATTAATCATTAAAT | + | 6.39 |
|
| | Number of super-enhancer constituents: 30 | ID | Coordinate | Tissue/cell |
| SE_00446 | chr9:38037884-38039884 | Adipose_Nuclei | | SE_02310 | chr9:38038302-38039234 | Astrocytes | | SE_05785 | chr9:38036275-38041022 | Brain_Hippocampus_Middle | | SE_23246 | chr9:38039331-38040674 | Colon_Crypt_1 | | SE_24298 | chr9:38039505-38040724 | Colon_Crypt_2 | | SE_26555 | chr9:38038020-38039151 | Esophagus | | SE_26555 | chr9:38039448-38040370 | Esophagus | | SE_27864 | chr9:38038535-38040327 | Fetal_Intestine | | SE_28791 | chr9:38038382-38040261 | Fetal_Intestine_Large | | SE_31580 | chr9:38039214-38040418 | Gastric | | SE_33929 | chr9:38038923-38040255 | HCC1954 | | SE_34811 | chr9:38034088-38040783 | HeLa | | SE_38030 | chr9:38034960-38040717 | HUVEC | | SE_38998 | chr9:38035048-38039881 | IMR90 | | SE_40993 | chr9:38037427-38040848 | Left_Ventricle | | SE_41666 | chr9:38039496-38040687 | LNCaP | | SE_42283 | chr9:38037522-38040704 | Lung | | SE_44329 | chr9:38035017-38039025 | NHDF-Ad | | SE_44779 | chr9:38035042-38040081 | NHLF | | SE_45758 | chr9:38034875-38040105 | Osteoblasts | | SE_47196 | chr9:38029911-38057164 | Panc1 | | SE_47459 | chr9:38038553-38038978 | Pancreas | | SE_48861 | chr9:38036997-38040800 | Right_Atrium | | SE_55662 | chr9:38034844-38039953 | u87 | | SE_57926 | chr9:38038484-38038814 | VACO_9m | | SE_57926 | chr9:38039528-38040314 | VACO_9m | | SE_65279 | chr9:38037547-38039359 | Pancreatic_islets | | SE_65279 | chr9:38039566-38041059 | Pancreatic_islets | | SE_67542 | chr9:38034844-38039953 | u87 | | SE_69063 | chr9:38039366-38040640 | H9 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH09I038035 | chr9 | 38035151 | 38041531 |
|
Enhancer Sequence | AATGTGCTCA ATGTCACACA GCAAAGGAAA GCAGCGGGTC TGCCTGACTC CCAGACTCCT 60
TCCTGCCCCA GCCCAGTGCC TCCTTCCCCA GGACACAGGG ATGCAGCCCA CTCTGCTCCC 120
TACTCGGGTC ATGAGCCAGC CCCGCTTCCC AGGCCAACCA ATGAGCTGCC TGGGCATCTA 180
GGAGGCCCCG GGGGTGGGGC AGGGAGAAAC TGGGTGTTGG GGAGTGACAG TGGGCAGGGG 240
CCACCCCCCA GGGAGGTATC AAGGAGAAGT AGGGAAAGGC AGATGGAACC CCGGAGAGGG 300
AGTGTGTGCC AAAGAGAACA AAGGCAGGAA TGGAGCGGGT GGGATCAGGA GCCCGAGGAA 360
GTGAGGAGAT GGAAGTTTTT TGAGACAGAC TGTCAGCCGT GAAGAAAAAC ATGTTTCTGA 420
ACTCCTGACG CTTATCGCTT ATCAGGCAGG GCTGGCGGGC GGGCGTGACA GCCCAGGACA 480
CTACACTACA AAAAAGGGGT CGCCAGAGAA CATTTTCTTC CCCGGAAAAA TGTGGATAAT 540
ACATAGCTGG AATGGTGAAA AGCATCCTTA AGATAAAGTG CCCTGTCAGA TACTGCTGTC 600
AGGCGTTAAG CCTCCAATGT TATCTCCAAA CCAGACAAAA AAACCTAAAA ACAAAAAACC 660
ACTTTTCTGA TTAATCATTA AATCTAAACA AGAAGAAAAC TGACAAAATG GGCTCTTTTG 720
CAAAAAAGAG CATTTTGAAT GATAAGCACA ATTGAAAGCC TAAGGCAAGA CTTTAAAGCG 780
CAGTGGGAAC TGCTTAGTCA TTAGCCTGTA TGTGCTGCTG CCACTTCAAG TTTGCAAGAA 840
GTCTGCAAGA TCCGAAGGGG GTCATGGCCC TGGGGCCAAG CACACCCATC CCACTTTGTG 900
GCAAAGGAGT ATGTGAATGA ATGGATTCCA AGATTCTGGA TTTTACTACC CTTGGCCCCT 960
CCCTGTGGGC CCAGTCCCTG CCATCTACAG AGCAGAGGTT ACAAAGCCAC GACAAGGTCC 1020
CGTTGTAATC CTACTTCCTG AACAACCTCT TTAACTTGAC CACACAAGGG CAGTAAAACA 1080
CGTAGCAAAG GGGTCATCCG GAAACAGCCC TGATATAAGA AGTACCTCAG GGAAGCTCAG 1140
CTCCCTCATG AGTCCAGGCC AGGCTGGCCG GGCCCACCAT CCCCTCCTGC CTCAGCGAGG 1200
GCAGCGGCTG GTCCAGTAGG CCACAGGCCT CTGGGGCAAC TTGCAGCTGG AGCTCGAGGG 1260
GCGAGGGGAG AGGAGGAGAA ATGGGCCTCT CGACAGGAGT CTGGCGGCCC ATGCCCTGCC 1320
CTCCATGAAT CCCTAGGCCC CAGTCTTATT TTAAGCCAGA ACCCAGGATT TGGGTTCTGA 1380
AACTGCATTC TAGAGCTGCG CCCCAGGCGT 1410
|
