EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-20349

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr7:6301130-6302220

Target genes

Number: 24
Name	Ensembl ID

CCZ1	ENSG00000122674
PMS2	ENSG00000122512
AIMP2	ENSG00000106305
SNORA42	ENSG00000207217
ANKRD61	ENSG00000157999
AC004895.1	ENSG00000240718
EIF2AK1	ENSG00000086232
AC004895.4	ENSG00000231704
USP42	ENSG00000106346
Y	ENSG00000238534
CYTH3	ENSG00000008256
FAM220A	ENSG00000178397
RAC1	ENSG00000136238
DAGLB	ENSG00000164535
KDELR2	ENSG00000136240
AC072052.7	ENSG00000231359
ZDHHC4	ENSG00000136247
AC079742.4	ENSG00000232581
C7orf26	ENSG00000146576
ZNF853	ENSG00000236609
AC073343.9	ENSG00000205903
RP11	ENSG00000260054
AC073343.13	ENSG00000228010
AC073343.1	ENSG00000198580

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

LMX1B	MA0703.2	chr7:6301451-6301462	AATTTAATTAA	+	6.32
Mecom	MA0029.1	chr7:6301606-6301620	TTGACAAGATAAAA	+	6

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

SE_30359	chr7:6295547-6303187	Fetal_Muscle
SE_37817	chr7:6299487-6302973	HSMMtube
SE_45796	chr7:6284676-6303010	Osteoblasts
SE_52194	chr7:6301321-6302630	Skeletal_Muscle_Myoblast
SE_64072	chr7:6301307-6302671	HSMM

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH07I006254

chr7

6294033

6303030

Enhancer Sequence

AGGCCAGGAG TTCAAGACCA GTCTGGGAAA CATAGTGGGA CCCTGGCTCT ACAAAAATAA 60
AAAATAATTA GCTGGGCATG GTGGCATGTG CCTGTAGTCC CAGCTACTTG GGAGGCTGAG 120
GTAGGAGGAT CATAGGATCA TTTGAGCCTG ACTGTGCTTC AGCTTAGGCG ACAGAGTGAG 180
ACCCTGTCTC AAAAAAAAAA AAAAAAAAAA AAAAAAGGGC AAAGTGATAT TCCCTTACTT 240
TAACTGCCTG CCAAATCCTC AAATGAAGCC AACAGGCAGG GTCTTGAATT ATCTCTATAA 300
TTTTTCACAT ACATTGTCCA GAATTTAATT AAAGCTCAAC AGGCATATCT AGAATCAAGA 360
TCACATGACT GAAAACCAAG GATAAAACAG ACAACAGAAC ACACTTACAA GGCATCCAAA 420
TATCGGAGTT ATCAGACACA GACTTTAAAA TAACTCTGAT TCATACAATA AAGCAGTTGA 480
CAAGATAAAA AATGCCAGCA GAAAATTGGA ATCTTTAAAA AAAATCAAGA AAACTGGAAA 540
AGACAATAAT GGAAATTAGG AACTCAATAA ACGAGTTCAA CAGCAATTAC AGCTGAAGAA 600
AGGATTACTA CAATGGAATA TAAGTCAGAA GAAGATACAG AGTGAACGAT GGAGAGGCAA 660
AGGGATAAAG GACACAGAAA AGAATCTAAG ACATACAGGA CACGACACAG AGGGCATGTT 720
TAATGCACAG GTAATTACAG TCCTGGAAGG AGATGAGACA GGAAATGCAG CAGAAGCAAT 780
CAATGAAGAG ATAATGAACA AGAATTCTGT AAATCTAATT TAAGATCAAG CTTTGTCACA 840
GCACTGCCAA AGAGAAGAAA AAGAACAACT AATCCCAAGC AGGATACACT TGAGGAAAAC 900
CACATCTGGA CACACCACAT AACAGCTGAA AACCAAACCC AAAGAGAACA TCTTAAAAGC 960
AGCCTAAAGG GAAGAAAAAA CACACTAACT GGAAAAGAGT GACAATAAGA CTGATGCAGC 1020
TGACTTCTCC ACAGAATCAG TGGAAGCCAG AAAGCAGTAA AACTACCCCT TCAAAACACT 1080
GTAGGAAGGC 1090