| Tag | Content |
|---|
EnhancerAtlas ID | HS177-19934 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr6:134609560-134610590 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RUNX1 | MA0002.2 | chr6:134610576-134610587 | AAACCACAGAC | - | 6.62 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_04175 | chr6:134608819-134610778 | Brain_Anterior_Caudate | | SE_05019 | chr6:134608781-134610660 | Brain_Cingulate_Gyrus | | SE_07062 | chr6:134608762-134610701 | Brain_Hippocampus_Middle_150 | | SE_08100 | chr6:134608788-134610625 | Brain_Inferior_Temporal_Lobe | | SE_34896 | chr6:134607631-134618801 | HeLa | | SE_36862 | chr6:134608039-134611351 | HMEC |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH06I134286 | chr6 | 134607645 | 134618737 |
|
Enhancer Sequence | ATACGCCTGG AGAAAAAGCC TGTTTAAAAC TAAACATCTT TTCCAAGGGT AAAACATAAA 60
ATCCTTGAAA TTAGGCTTTC TAATGGGCAA AGAGATGTCT TCAACCATTT TATGATGAGA 120
AATACATTGG TTCATCCTCA GAGGTCTCTG AACAAAAAGG GGAACACATG TGAAGGTAGT 180
CATGAGGGAG CCTCTGTGAA TCATAAGGAG AACTGATTGC AAAACCAGAA GCCAGCAGAA 240
ACAAAACAAT TCATAAAATT ACAGAGGCGG TATTCGGAAG TTCTAAATAC TTTTTTTTCC 300
ATCTCAGAAA TGCTTGGTAT CCTAATAATA TTTTCTTTGT GATACGTTTT CTATACTCTT 360
AGTAATTTTC CCTGGTCTTG ATCTCATCAT TAAAGAGGAT GAAACCAACA CCAGGAAATG 420
TCCATAAGCA GGAAACCACA TTTTTATTCC ATCACTCATA AAGCATCATT CATAATAATC 480
AGTGTCAGTT TAGCTATAGC AACAGATGCT AACATACACA TAGTAAGAGC CTACAAAGGC 540
TCTTTTAAAT GTCAGTTTAA TTTAAACCTT AACCTCAGAT TTTTTCCACA GATACAGTGA 600
GAAACCACAA AGATCCTCCT GTCCTAATGC TCCCTCCATA CTCTGCAATA AAAGTTCTTG 660
TTTTGGAAAT AGAGAAACCT GTCTGAATCA GCAGTCTTGG CTTGCTGTGT CCTCCATGAC 720
CACACCACAT GTTCCATACC TTTAGCCTTC ATAGGGGCTG GAAAAAACTC TGTCTCCCTT 780
GTCTACCCAT TTTCACTGTG GAGTTCGGCT GCACATTTCA GGTGGAAAGG AGGTAGTGTA 840
CTAAAATTGC AAAGTATTTC TTTTAATTGG CAATGAATTT AAACAATATT CATTGATTCT 900
TCCACTATGA ACAAGCTAGT GTTCCCTGGG GGATAAACAG ATGAATAATT GGATAAGCCT 960
TTACTACTCA GGAAGTGTAT AGTCTAGAGG AGTGCAGTCC AATAGGAATA GAATATAAAC 1020
CACAGACACA 1030
|
