| Tag | Content |
|---|
EnhancerAtlas ID | HS177-19834 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr6:116550320-116551120 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RFX1 | MA0509.2 | chr6:116550613-116550629 | GGTTGTCATGGTAACA | - | 7.21 | | RFX1 | MA0509.2 | chr6:116550613-116550629 | GGTTGTCATGGTAACA | + | 7.24 | | RFX2 | MA0600.2 | chr6:116550613-116550629 | GGTTGTCATGGTAACA | + | 6.93 | | RFX2 | MA0600.2 | chr6:116550613-116550629 | GGTTGTCATGGTAACA | - | 7 | | RFX5 | MA0510.2 | chr6:116550613-116550629 | GGTTGTCATGGTAACA | + | 6.55 | | RFX5 | MA0510.2 | chr6:116550613-116550629 | GGTTGTCATGGTAACA | - | 6.82 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH06I116228 | chr6 | 116550108 | 116551187 |
|
Enhancer Sequence | TTAACCAAGC TAGTAAGCAA AAACCACAAT TACTTTTGCA CTAACCTAAA AAATCAGTCA 60
TCCTCATTTC TTCCCTCCCT TTTAAGTTGT CCTTCTGTTT TCTCAGGTTT GTCCTCACTA 120
CATTCCCACC ACTGCCCGCA TCATCCCTTG TGTGAAATGG CACAATATTT AAGTCATTGC 180
TCCAAATGGT TAAAGTAAAG TTAATGCAAC TGAGCTGGCT GGGATGGAAG GCACAGCGAG 240
CCAATCACGA AACACAGCAT GGCCTTAGCG AGTCGCACAG GTTTGACGTC AGCGGTTGTC 300
ATGGTAACAG GGGCAAAGAT GCTGATGCCA GTGTCAGTCA GGACTGAGCT CCTCCCTCCA 360
GTCTGATTCC TGCCAGTGCT TAAGGATGTA TGGAGGGGAG AAGCGTCTTC CAAGCAAAAT 420
CTTCATCCTC TGTTCTCTAT CACGTGCAGT GCGTCACCAG ATCCTCGCCA GTGCTGAGGG 480
TGGGGATACG GGGGAATCTC TGACTTGCAA GATTAAATTA TCATTGGAGA GGGAACGTGT 540
CAGCCTTGTT CACCGCAGTG TCGCCAATGC TGCTAGCTCA GTTCCTGCCC CTGCCCACCA 600
TTGGGAGAAT CATGAGCCAA CTCTCTCTGT CTCTCCTCTC TCTCTCTCTG TCTCGTCCCT 660
TGGCCTTAGC TGTCACCAAT ACACTGACTC TGACTCCCAA ATCTTTCCCT GAGACCTGTT 720
TTCCTGAGTC TCATACGCAG TTCCTCCTCC ACACTAGGCA GCTCCACTCA GTGTTCTGAT 780
ATCAAGCTTG AGATTCTCCT 800
|
