| Tag | Content |
|---|
EnhancerAtlas ID | HS177-19481 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr6:56579690-56580290 |
Target genes | | Number: 11 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| REST | MA0138.2 | chr6:56579789-56579810 | GGCCCTGTCTTTGGTCCTCAC | - | 6.16 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_04054 | chr6:56577622-56580027 | Brain_Anterior_Caudate | | SE_04054 | chr6:56580203-56581696 | Brain_Anterior_Caudate | | SE_05038 | chr6:56577633-56581913 | Brain_Cingulate_Gyrus | | SE_07000 | chr6:56579364-56581837 | Brain_Hippocampus_Middle_150 | | SE_41223 | chr6:56577648-56581847 | Left_Ventricle | | SE_45793 | chr6:56576771-56581864 | Osteoblasts | | SE_47337 | chr6:56571865-56581925 | Panc1 | | SE_56281 | chr6:56576928-56581664 | u87 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH06I056712 | chr6 | 56576922 | 56581739 |
|
Enhancer Sequence | ATATTCTTTG GATTATACCA GTACACCAAT CATCATTTTA CTTATAGTTT TATGTAGACA 60
ATATACATAA ATGTATTAAT AATTTCCTTA AGAAGAAAGG GCCCTGTCTT TGGTCCTCAC 120
TGCAAATGCT TAATGTCTGA CACAGTGCCT TTCATATAGT AGATATTCAA AGAACTTTTG 180
TTGAATAAAC AAAAGATTAG TCACCTACAC TTTGCATTTG ACCTTAGCCA TGCACTCAGC 240
TGTGGGCTCT TGAATGCCTG CCGGATCACA GGGAAAAAAA CAGAAACTCA GGAAATGGAT 300
TCACAAATCC CATCAAATGA CTTCCTAGCA GGGGATTTGT GTTTGCCCCA AGGCCCATCA 360
TGGCATCTAT CGGAGTTAGT GCCTGGCATC ATGTTCTGCC ACACAGTTGG AGTTAAGTAA 420
ATTGCTTCTG AATGACTAAC ACATTGAAGA GAAATGTCCA CTTCTGCATG CCAAGCCTCC 480
TAAGTATTTC CCCTATTAAG GAGCACAGAA TGACACCTCC AAAGTATGGT GCTTTGGCAT 540
GCTGAGCACT TTGAAGAGAA GAAATTGGAA GTCTTTAGAA GTTGCCTAAC TTTCTAACCT 600
|
