| Tag | Content |
|---|
EnhancerAtlas ID | HS177-19259 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr6:33538520-33539640 |
Target genes | | Number: 18 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Gata1 | MA0035.3 | chr6:33539397-33539408 | TCCTTATCTGT | + | 6.14 | | Myod1 | MA0499.1 | chr6:33538697-33538710 | GGTGACAGCTGCA | - | 6.5 | | YY1 | MA0095.2 | chr6:33539199-33539211 | GCGGCCATCTTG | - | 6.62 |
|
| | Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
| SE_10724 | chr6:33537553-33540480 | CD19_Primary | | SE_12367 | chr6:33537599-33540406 | CD3 | | SE_15122 | chr6:33537647-33541226 | CD4_Memory_Primary_7pool | | SE_15643 | chr6:33537713-33540264 | CD4_Memory_Primary_8pool | | SE_16059 | chr6:33537640-33540103 | CD4_Naive_Primary_7pool | | SE_16811 | chr6:33537720-33540262 | CD4_Naive_Primary_8pool | | SE_17741 | chr6:33536568-33541584 | CD4p_CD25-_CD45RAp_Naive | | SE_18195 | chr6:33536568-33541740 | CD4p_CD25-_CD45ROp_Memory | | SE_19684 | chr6:33537966-33540911 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_21876 | chr6:33537838-33540167 | CD8_Naive_7pool | | SE_22263 | chr6:33537639-33540503 | CD8_Naive_8pool | | SE_23054 | chr6:33537548-33541008 | CD8_primiary | | SE_23452 | chr6:33538536-33539961 | Colon_Crypt_1 | | SE_24002 | chr6:33538588-33539841 | Colon_Crypt_2 | | SE_50523 | chr6:33538390-33540761 | Sigmoid_Colon |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH06I033569 | chr6 | 33537687 | 33540496 |
|
Enhancer Sequence | GGATTTTTTC AAATGAAAGG GTTTGGATGG ACACTCGGTG ACTCTCTAAA ATATACTCTT 60
CAGAGGAGGT AAAAATAAAT ACGTGAAGGT AAAACGGCAG GGTGGGGGTG GGGAGAATGT 120
GAGGCTGTTG TGTGCAAGGA AGGGCGGGTA TTCATACTGA AACTGCAGAA CTAAGCAGGT 180
GACAGCTGCA CACCGCTCCT TTCCCTGGCC GGGCTGCCCC AGCTCAGTGA CATCACAGAC 240
TGTGACGAAC CCAGACGTAT TTGGTGGAAA CCAAGCCACA ATCTCAGAAG CAGCGCACAG 300
TTTGAGTAGA AATGAGTTTT TTTGGTTTCT CTTCCCTAAT ACCCACAGAG CCCCTACACT 360
CCCGTTATCC TCGCAGCCCC TGGCTGACTG TGTCCGACCT AACTTCTCGC CCCCTGGTTT 420
CAGAATATCC TGGCAGCGGA ATAGAGGGCG TTGGGGGGCG GTGCAGGCCA AAACTTTTTG 480
GGCTGCCCCA CCCATGCCTT TCCGGTTAGC GTTGCAGCTC CTTAGACGAG TAGGCTAACC 540
ACAGCCCACC CGCCTTTCTT CCAGCGATGC AACGATCTGT TCGCCGCTCA ATGCCGCATG 600
CTGTTCAAAG CCCAGAGGCT GGAGTGGGTG CGCCCCAAAG GCCCCGCCCA AGGAAGGGCA 660
CGCTTGCGTG CTCGCGGCGG CGGCCATCTT GGACTCGGGC AGCCGCCCAC TTCTAACCTC 720
TATGGCATCG CTCCGGGAGG GAGGCGACCC CGCACTCTGG GCCTCTTAAA CCTGTGCTCG 780
CGAGCCCCAC ATTGCTCTCC GGCCTCCACG TAAAACTCGA GCCAGTTTCC TGGTGGCAAG 840
TCCTCACTCC TTGGGTGACT CTGAGAAAGC ACCCGTTTCC TTATCTGTAA ATAGTAGTTT 900
GAGTACCCCC ACCCCCGTCT CCTACCTATT ATTTGGGCAG ATGATGAACT CTCAGCATAA 960
AGCCTGGCAC ACAGTATGTG TTCTATAAAT GTTGTCTGTG AGCTTTTCCT GTACACTGCG 1020
GGGTGCCTTG TAGCAACCAC CTTCCAGCCA CCACTGCCTG CAGCGCCGCC TTTTCCCTTT 1080
TCCAAGATCG CGTCTGTACT AGACTCTGAA GACCTTGTGG 1120
|
