| Tag | Content |
|---|
EnhancerAtlas ID | HS177-18948 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr5:178711830-178712880 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr5:178712186-178712207 | GGTGAGTTTCACTTTTTATTA | + | 6.19 | | Nkx2-5(var.2) | MA0503.1 | chr5:178712413-178712424 | CTTGAGTGGCT | - | 6.62 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_00403 | chr5:178711035-178713804 | Adipose_Nuclei | | SE_37258 | chr5:178711380-178717373 | HSMMtube | | SE_44454 | chr5:178711628-178713038 | NHDF-Ad | | SE_44902 | chr5:178711627-178713022 | NHLF | | SE_45634 | chr5:178711512-178713094 | Osteoblasts | | SE_46673 | chr5:178711820-178712204 | Ovary | | SE_46673 | chr5:178712317-178712733 | Ovary | | SE_51907 | chr5:178711714-178713019 | Skeletal_Muscle_Myoblast | | SE_63691 | chr5:178711539-178713101 | HSMM |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH05I179284 | chr5 | 178711646 | 178713211 |
|
Enhancer Sequence | GCGGCAAGCC CAGCTGCAGC ATGACCTCCT TACGTAAAAT CATGTATATC TCTGTGCCAA 60
ACGTCAGCAC AGTCTAATAA TTAAGCATGT GGCCTCCGAG TCACTCTGCC TCGATTCAAA 120
TGTTTACTTC ACCTCTGACT GAGTGGCCTC TCTGTGGACA GTGTCTGCAG GGTTGAATGG 180
AGATAATAAC AGGGTTTCCA TGGCTGATGT GAGGGCTAAG CGAGATACTG CGTCTCTAGC 240
ACTGGGCACA GCACGTGATA AATCAGCCGA CTGGCAGCAC CATCACCATC ATGATGATCA 300
TGGCATGACA GCTGTTAGGA AACGCGTAAC AAAGGGTCAG CAGTGTTACG ATCGGGGGTG 360
AGTTTCACTT TTTATTAATA TTTTCTGTAT TTTTTTTGTT TTACATTTTT ACAAAGGGCA 420
TATAGCAAAA CAGACAATTC ATGTGAAGAC AGGAGAGACG GAAAGGGGGA GAGCACAGAG 480
AGAAAGATAA GGGGGAAAAT GGAATAAACA AGATGCCGAC AAGAATGCCT CACGGGGCCA 540
GCGCAGGGGC CAGCCAGGCG GCCTTCTGCT AAATCAAGCA ACGCTTGAGT GGCTCCCTCG 600
GGACCTGGCC TGTCCAGAAT GTCCCACACT CAGCCCTCTG CAGCCAGCTC CCCCATCTCC 660
ATGGCTCCTG CACACACCAA TGCCGGGGTA GCCTCCAGGA AACAGAGCTG GCCAGCCAGA 720
CCCAGCCAGG ACACAGAGGT CAGTGGGTCA GACCCAGACT CTGGGACTGC AACAGGCCTG 780
CCTATTTGTG ACGAGAACTG ACACTCGTCC CGGCCAGATT CTCTGGCTGA CATTTCCCAG 840
GTCTCGTTCA GCATGAAGCC CACGTCGGGG AACGTCCCCA GTCACAAATT AACATTCACA 900
TAAATAACAG GGCGCTCTCT ACTAAAGAAG AAAAATGACT CGTGCTGCAG GAACATTTGC 960
CAAACTATCA AAAAGCAAGA TTTTTCTTTC TGAGCTTCCA TGTCTCACCA GCTGGACCAC 1020
AGCAGATTGT GGCCTTGAGA CGTGTGGTGG 1050
|
