Tag | Content |
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EnhancerAtlas ID | HS177-18874 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr5:171870380-171870940 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
TBX21 | MA0690.1 | chr5:171870709-171870719 | TTCACACCTT | - | 6.02 | TBX2 | MA0688.1 | chr5:171870708-171870719 | ATTCACACCTT | - | 6.02 |
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| Number of super-enhancer constituents: 18 | ID | Coordinate | Tissue/cell |
SE_00928 | chr5:171870181-171871495 | Adrenal_Gland | SE_04308 | chr5:171870187-171871168 | Brain_Anterior_Caudate | SE_05113 | chr5:171869702-171874871 | Brain_Cingulate_Gyrus | SE_06023 | chr5:171869875-171874707 | Brain_Hippocampus_Middle | SE_07041 | chr5:171869742-171874591 | Brain_Hippocampus_Middle_150 | SE_08116 | chr5:171869515-171874528 | Brain_Inferior_Temporal_Lobe | SE_25970 | chr5:171869231-171871906 | Duodenum_Smooth_Muscle | SE_26839 | chr5:171869745-171872389 | Esophagus | SE_29714 | chr5:171870107-171871515 | Fetal_Muscle | SE_32077 | chr5:171870181-171872383 | Gastric | SE_43258 | chr5:171870141-171871492 | Lung | SE_44523 | chr5:171869414-171872035 | NHDF-Ad | SE_45975 | chr5:171869473-171872377 | Osteoblasts | SE_46662 | chr5:171870200-171870783 | Ovary | SE_46662 | chr5:171870819-171871468 | Ovary | SE_50406 | chr5:171869661-171872462 | Sigmoid_Colon | SE_53173 | chr5:171869663-171872373 | Small_Intestine | SE_54733 | chr5:171869250-171872443 | Stomach_Smooth_Muscle |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH05I172442 | chr5 | 171869697 | 171872485 |
|
Enhancer Sequence | TCTACGTTCA AGGGCCCTCT GAATTCCACC CATGTAAAGA ACCCCACTGC TAGTCAGCTT 60 TCCCAGCCCC TGAACACCCC TTTGCTTTTG AACCCAGCTG ACAGTGCACC TCTCTGTCCC 120 AGCAGGAACG GGTACTCCAG GCCCTGTCGC AGCCCTTATC CTATGGAGAT GCATTCTGAA 180 CAGATGGTGA CCTCTGTGAG GACAAGACTG TGCTTGGTCA TCTTAGCCTC TCTCTGGCTC 240 TGGGCCAGAC CTGGCCCAGG GCAGACAATA AACCCACATC TGTGGAACTG ACTGGAAGCC 300 AACAGTGGCC TGAAGCCACA GGCTGCTGAT TCACACCTTG GCTGAGGAGG AGGAAATGGT 360 GACGCCAACG CGTGGGTTCT AGCTTTCTTT GCCAGCACAG CGGGCGGGGG GCCATGCAAT 420 TCTGCTTAAT TAAACAAAAC AGAAAATACC ATGCTTATGT GCTTGAAGGC AACTTTTCCA 480 TTCAGGACGG AGGTCGGGGC TGGGAAAGTG ACTATCCCCT TATTACCAGT CAGTGATAGG 540 CAGGGGAGCC AAAAGTGATC 560
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