EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-18729

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr5:157001830-157002610

Target genes

Number: 16
Name	Ensembl ID

MED7	ENSG00000155868
CYFIP2	ENSG00000055163
FNDC9	ENSG00000172568
CTB	ENSG00000248544
NIPAL4	ENSG00000172548
AC106801.1	ENSG00000253519
ADAM19	ENSG00000135074
U6	ENSG00000252068
AC008694.2	ENSG00000254336
SOX30	ENSG00000039600
AC008694.3	ENSG00000253798
THG1L	ENSG00000113272
LSM11	ENSG00000155858
CTC	ENSG00000253630
CLINT1	ENSG00000113282
U2	ENSG00000222626

dbSUPER

Number of super-enhancer constituents: 17
ID	Coordinate	Tissue/cell

SE_02308	chr5:156999990-157003981	Astrocytes
SE_10372	chr5:156996424-157003605	CD19_Primary
SE_10863	chr5:156980024-157004770	CD20
SE_14730	chr5:157000412-157003386	CD4_Memory_Primary_7pool
SE_18164	chr5:156996358-157003863	CD4p_CD25-_CD45ROp_Memory
SE_19604	chr5:156996258-157003771	CD4p_CD25-_Il17p_PMAstim_Th17
SE_25805	chr5:157000378-157003019	Duodenum_Smooth_Muscle
SE_36955	chr5:156997079-157003957	HSMMtube
SE_39094	chr5:157000674-157003478	IMR90
SE_42416	chr5:157000646-157003624	Lung
SE_46096	chr5:157000919-157003524	Osteoblasts
SE_50178	chr5:157000619-157003683	Sigmoid_Colon
SE_51718	chr5:157000596-157003393	Skeletal_Muscle_Myoblast
SE_52470	chr5:157001048-157003497	Small_Intestine
SE_54595	chr5:157000491-157003727	Stomach_Smooth_Muscle
SE_62383	chr5:156965587-157041636	Tonsil
SE_63503	chr5:157000601-157003489	HSMM

Enhancer Sequence

AGTCAGACCC CTTCGCTTCA CAGAAGGGGA AACTGAGGAC CAAAGAAGGC GGCCGTCGGG 60
TTGGCGTGGA AAGAGAGCCC TGGTTTCCAG TGCCACCGCG GACCTCAACC CGTGGCGTGG 120
CCTTGGGCAA GTCCTTTCCC TTTTGTGGGC CTCGGTTTCC CCATCTGTGA AATGGGTGCG 180
TTTGACTTGG CCTTCAGTAG GGCTCCTGCC AGCTCGGGGA TCCGAAGTGT GTGGCTGCAG 240
ATACCCAGCG AGCCATCCCC TAGCCAAGGC TACCACAGTC TGCCGCGGGC ATTTTATGTC 300
CTACCCCACC AGTGTGGCAG GCACCGAGCC TGGTCCCAGG AAGCCGCTCC CAGGCCACAC 360
GGGCAGGGCG CTCGGGATGC TCGGCGTTGG CGAGTGCAGC GGGCGGTAGA GAGAAAGACA 420
GAGAGAGAGG CGGAGCGGAC ACGAGGGACC GTGAGAAAAC GGAGGAGGAT AAGCCCCGAG 480
AACGGCGGAA AGAGAAGCCA AAAGCAGAAA AACAGAGGAA GGAGAAGGCG AGAAGGGAAG 540
GCTAGCCAGT GAGCGGACCG GCTGTTTTCT GGCTGCGCCG GGTTTCCCCG ACCTCTGCCA 600
CCTCCCAGGG CGCAGAACGT GGGAACAAAG CCCGGGCTCC CAGGCTGGGG ACGGCGGGGG 660
CGCAGGCCCC GCGGAGTTGC GGGAGGCGCA GGGGTCGCGG TCCCAGCGCT CCGGACCCGC 720
AAGGCTACTC CCAGGTCTCC GGGCCACCCA GCCTCCATCC CCCCGCGCCT GGCCACTTAC 780