| Tag | Content |
|---|
EnhancerAtlas ID | HS177-18658 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr5:149523730-149524510 |
Target genes | | Number: 13 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| PLAG1 | MA0163.1 | chr5:149524264-149524278 | GGGGCCCAAGGGAG | + | 6.47 | | RREB1 | MA0073.1 | chr5:149524445-149524465 | CCCCCACCCACCCCGGCCCC | + | 6.07 |
|
| | Number of super-enhancer constituents: 18 | ID | Coordinate | Tissue/cell |
| SE_01616 | chr5:149522368-149531317 | Aorta | | SE_02316 | chr5:149516216-149525489 | Astrocytes | | SE_06395 | chr5:149513905-149524600 | Brain_Hippocampus_Middle | | SE_26224 | chr5:149516932-149524357 | Duodenum_Smooth_Muscle | | SE_27738 | chr5:149519408-149524761 | Fetal_Intestine | | SE_30133 | chr5:149519490-149525883 | Fetal_Muscle | | SE_37403 | chr5:149516288-149525579 | HSMMtube | | SE_38877 | chr5:149513384-149525852 | IMR90 | | SE_41433 | chr5:149513840-149531321 | Left_Ventricle | | SE_42972 | chr5:149522371-149525580 | Lung | | SE_44467 | chr5:149517172-149526858 | NHDF-Ad | | SE_45052 | chr5:149516880-149525103 | NHLF | | SE_45926 | chr5:149516412-149531211 | Osteoblasts | | SE_46663 | chr5:149522410-149524776 | Ovary | | SE_48989 | chr5:149522381-149524804 | Right_Atrium | | SE_52451 | chr5:149519454-149525427 | Small_Intestine | | SE_53930 | chr5:149514696-149525823 | Spleen | | SE_56386 | chr5:149521492-149525082 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH05I150133 | chr5 | 149513443 | 149528910 |
|
Enhancer Sequence | TCCCACCGCC AATCTCCTCA CCTCCAATCT GTCCCCTCCA CCTGTTCTCA CACCCCAGCC 60
AGAGGGACCT TTCTGAAATA CCTATGTGAC CTCTCCGGCC CTCCTCTGCT CTCCATCCCC 120
CTCAGGCAAA GGCTGGCTTC TCTGCCCAGC CTTTCAGAAT CTTCCGGCCC GGCCCTGACA 180
GCTCCCTCAC AACTGAGGGA GGAAGGCGGC TGCCCCTCCA GCTCCCCAGG GCCCAAGCCA 240
GGCCCTCACA CTCGTCACTC ACTGCATGCT CCTCTCCCCA TGAGGCCTCC CCAGGGAACA 300
CAATGGAAAG AAATGACCTA TTTTCTGGAA GTCCAAAATA AGATGAAACA TCTGTCTGGA 360
ATGGGGCCAG GCTGATAAAG AACGGGCTGA TCTCCCCAGC CCGAGCCCCG CTCTCCTGCA 420
GCAAACACCC CCTCACCCGT CAGAGTGCCT GTGCTTGGGG GTGGGGGCAG CGATGCGGCT 480
GGCTACTTGG AACAGTGCGT GGGAAAGCGC TCAGTGTGTG CCTCACGGCT GCTGGGGGCC 540
CAAGGGAGGG GGCCTGGGTC CCCAGGAAGG CTGGGAAGCA GCCTGAGAAG GAGGTCAGTG 600
AGGGAGGGAG GCCTGCTGCA CACCCCTGCC CACCGGCTGC AGAGCAAGCA CTTCCTGCCT 660
CCTGCGGTGC CTTGAGGGTT ACCCCCAGGG CCCTGTGGAT TCCTGGCCCT GAGTCCCCCC 720
ACCCACCCCG GCCCCATCTG GGCCTCCAAC AGCCTTAAAA ATAACAATAA TAATAATAGC 780
|
