EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-18548

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr5:141061230-141061730

Target genes

Number: 27
Name	Ensembl ID

TAF7	ENSG00000178913
AC005618.1	ENSG00000255729
PCDHGA1	ENSG00000204956
PCDHGA2	ENSG00000081853
PCDHGB1	ENSG00000254221
PCDHGA4	ENSG00000262576
PCDHGB2	ENSG00000253910
PCDHGA6	ENSG00000253731
PCDHGA7	ENSG00000253537
PCDHGA10	ENSG00000253846
PCDHGB7	ENSG00000254122
PCDHGC3	ENSG00000240184
AC008781.1	ENSG00000242020
PCDHGC4	ENSG00000242419
PCDHGC5	ENSG00000240764
AC008781.7	ENSG00000228737
DIAPH1	ENSG00000131504
HDAC3	ENSG00000171720
RELL2	ENSG00000164620
FCHSD1	ENSG00000197948
ARAP3	ENSG00000120318
KIAA0141	ENSG00000081791
RNF14	ENSG00000013561
GNPDA1	ENSG00000113552
AC005740.4	ENSG00000250347
NDFIP1	ENSG00000131507
SPRY4	ENSG00000187678

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr5:141061521-141061532	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr5:141061522-141061532	GGGGCGGGGC	-	6.02
ZNF263	MA0528.1	chr5:141061561-141061582	GAGGGAGGGGGCGAGGAGGGA	+	6.03

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_38497

chr5:141058703-141063985

HUVEC

Enhancer Sequence

ATCTTGAGTT GTATCTGTGT CTCTGTCTGC CTCTGAGCCT GGGTTTCTGT CTTCCGCCTC 60
GGCCTAGGCT CTCTCCCTGT TACTCTTGTG CTCTGTCGGT GACCAGGACG CCCTCTCCGT 120
CCCAGCATCA CTGCTGGCCT CCCTCTGCCT CTCTCCAGCT GGGCCTCATT CCCAAGCCAG 180
GGCCCGCGTG CTGAGCCTCG GGCCCTGACT CAGGGCCCGG TTTCCCGGTG ACTCAGGCCG 240
GGCTCGACAG CACGGGGCTG GGAGCTGAGG TGCTCGCGGG ACAGGAGTGG CGGGGGCGGG 300
GCGGGCAGTG GCGGGCAGCG CAGGCTGCGA CGAGGGAGGG GGCGAGGAGG GATGGGGCAG 360
AGGCCGGGCA GCAGGAGGGA GGGGCGGGTC GTGGCAGGGA TGGGGAGGGC CGCCGGCGCC 420
GAGGGGGCCT GGGAGCCCAC GAAGGCCCTC GAGAAGGTGA TGGGGAGGAG TCTGGGAAGC 480
AGGGACCCGG GGGGCGCGGG 500