EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-18546

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr5:140914010-140914540

Target genes

Number: 29
Name	Ensembl ID

SLC25A2	ENSG00000120329
TAF7	ENSG00000178913
AC005618.1	ENSG00000255729
PCDHGA1	ENSG00000204956
PCDHGA2	ENSG00000081853
PCDHGA3	ENSG00000254245
PCDHGB1	ENSG00000254221
PCDHGA4	ENSG00000262576
PCDHGB2	ENSG00000253910
PCDHGA5	ENSG00000253485
PCDHGB3	ENSG00000262209
PCDHGA6	ENSG00000253731
PCDHGA7	ENSG00000253537
PCDHGB4	ENSG00000253953
PCDHGA8	ENSG00000253767
PCDHGA9	ENSG00000261934
PCDHGB6	ENSG00000253305
PCDHGA10	ENSG00000253846
PCDHGB7	ENSG00000254122
PCDHGA11	ENSG00000253873
PCDHGB8P	ENSG00000248449
PCDHGA12	ENSG00000253159
PCDHGC3	ENSG00000240184
AC008781.1	ENSG00000242020
PCDHGC4	ENSG00000242419
PCDHGC5	ENSG00000240764
CTD	ENSG00000246422
HDAC3	ENSG00000171720
ARAP3	ENSG00000120318

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NEUROD2

MA0668.1

chr5:140914312-140914322

GCCATATGGT

6.02

Enhancer Sequence

AAAGATTAGA AAAGCATGAT TAAAAGTAAG CCACCTCTGT GCTTTACCAA GCAACTACTG 60
TCCAGCGTGA AATGGCCCCT CACTTCCTCT CTATTATAAT GGTCTATTGT ATTCCTTCAA 120
AACTAACCTC CTCTTCAACC AACCACCCTT TTATTACTGA ACCTCCCCCA ACTCTAATAA 180
ATATCTCATT TTCATTTCTT CAATATTTAT CAGTAATGCT TTCCTACCTA CATCCTATCT 240
ACTTGCAGGG ATCAGCAAGC TGCCTGTAAA GGACCAGATA GTAACTATTT TAGGCTTTGC 300
AGGCCATATG GTCTCAATTA TTCAACTCTG CCACTGTAGC ATGAAAGCAG GCACAGACAA 360
TACATAAATG AATGGGCATG GTTGTGTTCC ATTAAAACTT GATTCACAAG AACAGTTGGT 420
TAGTAGTAGT TCAGCAGTCC CCTTCCACCA TGTTATCCTT CCTTTTGTGC CTATTTAAAA 480
ATCCAACTTA TCTTTCAAGC TCCATCTTTT TTGTTTGTTT TTTGAGACAG 530