Tag | Content |
---|
EnhancerAtlas ID | HS177-18543 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr5:140892660-140894580 |
Target genes | Number: 28 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr5:140893279-140893297 | GCTCCCCTCCCTCCTTCC | - | 6.01 | RFX1 | MA0509.2 | chr5:140893579-140893595 | TGTTGTCATGGGAACC | + | 6.02 | RFX1 | MA0509.2 | chr5:140893579-140893595 | TGTTGTCATGGGAACC | - | 6.05 | RFX2 | MA0600.2 | chr5:140893579-140893595 | TGTTGTCATGGGAACC | - | 6.03 |
|
| Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
SE_01329 | chr5:140891386-140895070 | Adrenal_Gland | SE_01882 | chr5:140884743-140897771 | Aorta | SE_02455 | chr5:140891557-140895288 | Astrocytes | SE_03479 | chr5:140892362-140894588 | Brain_Angular_Gyrus | SE_08893 | chr5:140892839-140893096 | Brain_Mid_Frontal_Lobe | SE_08893 | chr5:140893755-140894403 | Brain_Mid_Frontal_Lobe | SE_27199 | chr5:140891350-140895495 | Esophagus | SE_29634 | chr5:140891398-140903037 | Fetal_Muscle | SE_36096 | chr5:140891386-140895832 | HMEC | SE_37107 | chr5:140891203-140904950 | HSMMtube | SE_39102 | chr5:140891787-140896498 | IMR90 | SE_42737 | chr5:140890181-140897806 | Lung | SE_45157 | chr5:140891585-140895403 | NHLF | SE_46154 | chr5:140891050-140898089 | Osteoblasts | SE_47017 | chr5:140892512-140894481 | Ovary | SE_51546 | chr5:140890736-140906117 | Skeletal_Muscle | SE_52049 | chr5:140892369-140899175 | Skeletal_Muscle_Myoblast | SE_56626 | chr5:140891437-140894970 | u87 | SE_58738 | chr5:140870606-140910872 | Ly1 | SE_59948 | chr5:140883227-140905331 | Ly4 | SE_60428 | chr5:140874228-140912009 | DHL6 | SE_63861 | chr5:140892288-140898912 | HSMM |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH05I141506 | chr5 | 140886036 | 140906054 |
|
Enhancer Sequence | AGATGTTTCC GAATTGCGTG TGTGTGTGTG ACTGTGCAAT ATGGTTGTGT ATGCTTGCAA 60 TGCCGTTGTG CCTATGAGAC AGTGTGCGAT TGTGTGCCTA TGGATCTGTG TACCGTGTGC 120 CATTGTGTGA TCGGTCCGCT GTGGGGGTGG GGATCTGAGT GCGGCGTGTC AGTGTGCAGT 180 GGAGTGTGCA GTCTAAGCTT GCGGCTGTCT CCAGGCAGAA GAGGAGACCC CGGCGCGGGC 240 GGGGGCGGGT TGGCGCCGGG CAAACGCCTT GGGTAGAGGG GAGAGGACGT TTCGTTAGTT 300 CCCGCCCCTT CCTGACTAAA ATTGCCTACC CGAAGCGCCC CGGAGGGCTT CACGGGAGGA 360 GGGTAGACTC TCCTTTGCCC CCGCACCCCC ACCCCCGCTG CCTAGGGGTT TTGGGAAAGC 420 CGCGGGAGTG GGAGGGAATG CGGGAGGTGA TTCTTCCAAA GCCAAGTCTG CAGCTCGAGC 480 CTCAGTTTCC CCATCTGGAA TTCGCCTTCC CGCTGACATC TCCGTAGCGA AGCCTAAGAA 540 ATTGGAGGGC TCATCCTCTT CTTGCGGGGG TCAAGGGGAC TGAAAGGACG TGCAGGAAAT 600 GAGATCCATC GCAGACTCAG CTCCCCTCCC TCCTTCCTGT CGGTGCTTTT CCACTCACTC 660 GCCTGCTCTC CCATCTCCCC GCCCCCTCCG CCTGCCTCCT CGAAGCACTG TGGGATTCCG 720 AGGTTGCTGC AGCCAGAGAA GCTGCAGAAA AACACGGAGC TGGGGGTGAA GGGGGACTTA 780 AAAGGGGAAC TACCCGGAAG GACCCAAGAA CACAAAGACA GAGCCACTGC GGTTATCTGG 840 CTGGTCAGCA AGGGTATGCG GCTTCCTCCG CGCTGCGGAG GCTCCCAGAG CCAGGTCACC 900 CATTCTGCCA GCTCAAGTCT GTTGTCATGG GAACCAAACC TTCCAACTTA AGAATCTGGG 960 GGCGACTTTC TAGCGTGGGA GGAAGGGTGG TGTGCACGGT TGCTGAGATG GAAGCAGGGT 1020 TTTGTTACTC AGAGCCAGGC TGCGGAGGGG CGGGGTGCCG GGCGCCTGGG TTCTATTCCA 1080 GGCACAGCAG CAGACTGGCA GAGCGCGTGA GCAGCTGTGG TTTGTCCCCT AATTGGTATG 1140 TGTGCCTATA AAGCTCTGAA CCAGAAAGGC GTGGCCTCCG GGGGGACGGG AGGGAGGCGG 1200 CAGGCAACCC ATCCCCACAC CTCAGGCCAT ACTGAGGAGG CAGCTGCCCA GGCTCCAGGG 1260 CTATTTAAAA GGCTTTTATT TCCAGTTCCA GAGCCCGCCC GAATGGGTTT GTGGTCCTCT 1320 CCAGGCCTCT CCCTGTCTAT CCTGGGCCTG CTCATTGCTG GTCTGGCTTT TTTGTGCAGG 1380 TCATAACGTG CTCAGACAAG TATGGCTCCA AGTGGCAAGT CATCTGGAGC ATGACCTCAG 1440 GCTCCCAACC TCTGCTGGGC AGGCTCAGGT TTCCACCCCA GGGTAAACCC CTCTACTCTG 1500 GAATGTGGTC TGTGGCCACC AACAGAGCAG AGGGGATGAG AAAATGGGAG CCAGATGCTT 1560 CCCTCAGCAA GAGACACAGG TACTGCCAGG AAACCTTGCG TGACATCTGG GAACATGAAA 1620 GGTTCCAAGT GAGTTCCAAA AAAGGGCTCC AAACCAAGTA GCAGCAATGT GGAAGAGTCA 1680 GGGAGCTGAA CCAGGCGCCC ACTCCTTTAC TGTGGCCAAA CGGCCCTGAG GTGAGCTCTG 1740 GTGGGGCAGC AGCCACCATG TATTAATCAT CTCTAGCCCT GTGCCCAAGT AAAGTGTCTG 1800 GCACCTTTAG CTTTTTCACA GTGATTTGTC AGGTCAACCA GGGATTTGAG GCAGGAAAGA 1860 CTAGAGGAGC CTGGACTAGA GTGAAAAGAA AACAGCTCAG AAATTCACAC AGGAAGCTGT 1920
|