Tag | Content |
---|
EnhancerAtlas ID | HS177-18523 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr5:139057330-139057690 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RARA(var.2) | MA0730.1 | chr5:139057466-139057483 | TGACTTCTAATTGACCT | - | 6.09 | ZNF263 | MA0528.1 | chr5:139057518-139057539 | GGAGGAGGGAGGGGGTGAGCA | + | 7.24 |
|
| Number of super-enhancer constituents: 36 | ID | Coordinate | Tissue/cell |
SE_00187 | chr5:139052580-139059377 | Adipose_Nuclei | SE_03140 | chr5:139056739-139059366 | Brain_Angular_Gyrus | SE_03865 | chr5:139055996-139061963 | Brain_Anterior_Caudate | SE_04768 | chr5:139026027-139072090 | Brain_Cingulate_Gyrus | SE_05771 | chr5:139026065-139074431 | Brain_Hippocampus_Middle | SE_06683 | chr5:139027027-139071104 | Brain_Hippocampus_Middle_150 | SE_07722 | chr5:139028082-139075240 | Brain_Inferior_Temporal_Lobe | SE_08785 | chr5:139056815-139058122 | Brain_Mid_Frontal_Lobe | SE_11063 | chr5:139026860-139059578 | CD20 | SE_13414 | chr5:139056780-139058400 | CD34_Primary_RO01536 | SE_20188 | chr5:139056880-139059135 | CD56 | SE_26221 | chr5:139056720-139057563 | Duodenum_Smooth_Muscle | SE_26778 | chr5:139056356-139058039 | Esophagus | SE_27739 | chr5:139056202-139058212 | Fetal_Intestine | SE_28684 | chr5:139056665-139058254 | Fetal_Intestine_Large | SE_29581 | chr5:139056057-139058505 | Fetal_Muscle | SE_30930 | chr5:139056057-139058331 | Fetal_Thymus | SE_31417 | chr5:139056046-139059186 | Gastric | SE_33677 | chr5:139055902-139059162 | H2171 | SE_36941 | chr5:139027373-139059446 | HSMMtube | SE_40649 | chr5:139056032-139059400 | Left_Ventricle | SE_41599 | chr5:139057494-139058017 | LNCaP | SE_42197 | chr5:139056073-139059249 | Lung | SE_45813 | chr5:139056829-139059282 | Osteoblasts | SE_47460 | chr5:139056780-139058230 | Pancreas | SE_48055 | chr5:139055919-139062629 | Psoas_Muscle | SE_48579 | chr5:139055935-139059336 | Right_Atrium | SE_49460 | chr5:139056809-139057877 | Right_Ventricle | SE_51090 | chr5:139055934-139059157 | Skeletal_Muscle | SE_54845 | chr5:139055998-139057753 | Stomach_Smooth_Muscle | SE_55730 | chr5:139057497-139059261 | u87 | SE_58504 | chr5:139012442-139092243 | Ly1 | SE_63555 | chr5:139056584-139057808 | HSMM | SE_65250 | chr5:139036623-139059169 | Pancreatic_islets | SE_67548 | chr5:139057497-139059261 | u87 | SE_68692 | chr5:139057230-139059117 | H9 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH05I139676 | chr5 | 139056126 | 139059178 |
|
Enhancer Sequence | AGATCAGAGA AATTCCAAGA GAGGAACAGA ACATGAGGTT TGGTCCCCAC CAGGAGAGAC 60 TCAGGACGGA GACAAAAGCC GAGACACTCA GCCAGAGCGC CAGCCCTGAG CGCAGGCCGG 120 CTGTGTTGGA AGGAGCTGAC TTCTAATTGA CCTGCCCGCC CCGCACGCAG AGCCAGATCC 180 TGGAGCTGGG AGGAGGGAGG GGGTGAGCAG AGCAGGAACA GCGTTAATGC AGCTATCGAT 240 TTCTGCCACC AGCCAGCAGG CCGCAGAGGC GGGGGACGCA CACAGGGGCT GGGGCGCAGC 300 CTGCTCCCCT CCCCATCTCT GCAGCCCACA AGACACCTGC CTTCTGCCTT CTCCCCTCAC 360
|