EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-17761

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr5:57130950-57131350

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Arntl	MA0603.1	chr5:57130958-57130968	GGTCACGTGC	+	6.02
TP53	MA0106.3	chr5:57131230-57131248	GGCTTGCCCAGGCATGAT	-	6.18

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_02642	chr5:57130367-57132317	Astrocytes
SE_35874	chr5:57127139-57139437	HMEC
SE_37298	chr5:57130071-57140008	HSMMtube
SE_46251	chr5:57130505-57139342	Osteoblasts
SE_51785	chr5:57130372-57139656	Skeletal_Muscle_Myoblast
SE_63574	chr5:57130358-57139717	HSMM

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH05I057834

chr5

57129900

57140119

Enhancer Sequence

GCTCCTGGGG TCACGTGCTT TCAACTGAGG CAGGATAGTG CTGTGGTCAT TAACTCACAT 60
GATAGAGCCC CGCTTTTGAG TGCATACAGC TTTTTCTAGT TTTAGTCCTA ACCTTCTGGA 120
GGTTGTTTTC ATTCCCTAGT GCAAGGGGTG GAACTCTGCT TCTCTGGAAA GTGTTTCGGC 180
CGAATGTTAT TCCAGCTATT GTCACTCTGT GGGGGAAGGA GCCTGGAGCA AAGGTACACA 240
GACTCTCCTC TCTGCAGGGG CCTGACAGTT CCCAGGCTGG GGCTTGCCCA GGCATGATCC 300
ACAGCACTCT GGAGTCTATA GGCAAACCTA GAAGAGAGCA TCTGTGCCTG TCACTTATCC 360
CTTTACTTGT CCTGGGTCCC ACAACAGAAA ATGGTGACAT 400