| Tag | Content |
|---|
EnhancerAtlas ID | HS177-17551 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr5:16568970-16569660 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr5:16569386-16569407 | CATTTCTTTCTTTTTTTTTTT | + | 6.04 | | ZNF263 | MA0528.1 | chr5:16569033-16569054 | GGAAGAGAGGGAAGGAGAGGA | + | 6.01 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_03286 | chr5:16568625-16569088 | Brain_Angular_Gyrus | | SE_03286 | chr5:16569346-16571598 | Brain_Angular_Gyrus | | SE_04197 | chr5:16566899-16571682 | Brain_Anterior_Caudate | | SE_04891 | chr5:16564015-16573409 | Brain_Cingulate_Gyrus | | SE_06170 | chr5:16566906-16571768 | Brain_Hippocampus_Middle | | SE_06950 | chr5:16563832-16573507 | Brain_Hippocampus_Middle_150 | | SE_07854 | chr5:16566633-16572068 | Brain_Inferior_Temporal_Lobe | | SE_63427 | chr5:16560239-16597423 | NCI-H69 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH05I016563 | chr5 | 16563833 | 16573507 |
|
Enhancer Sequence | ATTAAACTCT CAACAATAAA AGTTTCATAT TTTTAGCGAG AAAACGTGGG AAGCAGAGAA 60
GCTGGAAGAG AGGGAAGGAG AGGAGACTGC TGACTTGGTC GTCCTTTCAT TGTCATTGTC 120
GTTGCTATAA GCCGGGGCAT CTAACAAGAG CAGCTGGCAG TTCTGATTGA CGCCATGGAG 180
TTACCGTAAC TGCATCTGGA TCTAACGTGA AGCCAAACTG TGCCCTGCAG AGACTGATTC 240
ATCGCAGCAG CAGCACCCTG CGCTAGGAGG CCTGCGAGAT GGGACTGCTG CCAACTATTC 300
ACAGGGCTCC CCAATGGGCC TTTGTCCTAA GAGACTCTAC TGAAGGAGGA TGAAGCTGGC 360
ACCAGAGTTT CTTCAGCACA GAAAACAGAG CTCTAGGAAG ACAGAGTAAT CATTCCCATT 420
TCTTTCTTTT TTTTTTTTTT TTTTTTAATT TTTCATGCAG TAGAAATGCT ACACTCAGAG 480
CACTGTCATC CGGTGAAGAC TGAAAGCCTG TCCTTGGACA ACGGCCTGAT CTACAGGATT 540
GCAGGGAGGC TCTGCCTCGA CAGAGGTCTG GTTCCCCACA GGGAGCCCAG CACCCAGGTT 600
GGGCCTCAGC ACAGAAAGGG GCTCAACACG GACTGACCCA GGAACACACA AACCCCATGT 660
GGCCCTGATG ACATGTCAGC TGGGCGAAGT 690
|
