EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-16249

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr3:193923370-193923860

Target genes

Number: 10
Name	Ensembl ID

RP11	ENSG00000238097
AC046143.7	ENSG00000233058
ATP13A3	ENSG00000133657
AC108676.1	ENSG00000244675
AC046143.6	ENSG00000232873
AC046143.5	ENSG00000231770
AC046143.3	ENSG00000229334
TMEM44	ENSG00000145014
LSG1	ENSG00000041802
FAM43A	ENSG00000185112

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NKX2-3

MA0672.1

chr3:193923593-193923603

ACCACTTGAA

6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I194205

chr3

193923391

193924672

Enhancer Sequence

ACGGCATTCC TCTCTTTATA CACATCTGTG TGTCTCCTCA CACACAGGCG TACATGCACA 60
CACATATGCA CACACACACA CAAGTGCTTG GCCCACTCAG CCTCCCCATA ATTTCACAAA 120
AGAGTGACTC TAATGTTTGC TGCCTCGTGG GGAGCCGGTG GGCACAGCAG TGGATTGGAT 180
ACCTACACCA GAGAAGGCCT GAGAGGCGTA ATCAAATAAG GGAACCACTT GAACTGAACT 240
CCCAGCAGGA GCGGGAGGGA GGCCTTGAGA GGTTACACGT AGTTTTTATC CAGCCTTGCA 300
GGAGAGCACC AACTTCCTGC TGCTAGAAAT TTGTCTGCAA ATTTTTTCCT CATTCAGACA 360
GAGAGCTGGG GTCCAGGAAA CACTGGGTTG ATATGATAAC TTGATTAAGT CTGGGGACAG 420
ATGACACGGG AGCACCAACT CGACTCAAAG GAACCTGTGC TCTCCTCTTT AACCTCTCCT 480
TGGGAGCCTA 490