| Tag | Content |
|---|
EnhancerAtlas ID | HS177-15223 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr3:57960370-57961230 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RARA(var.2) | MA0730.1 | chr3:57960663-57960680 | AGGTCATCCTGAGGTCT | + | 6.32 | | ZNF263 | MA0528.1 | chr3:57960877-57960898 | GGGTGAGGGTGAGGAAGAGGA | + | 6.55 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_23194 | chr3:57960298-57961228 | Colon_Crypt_1 | | SE_23980 | chr3:57960441-57961140 | Colon_Crypt_2 | | SE_27681 | chr3:57955209-57961457 | Fetal_Intestine | | SE_28779 | chr3:57956485-57961614 | Fetal_Intestine_Large | | SE_34631 | chr3:57952227-57967994 | HeLa | | SE_38454 | chr3:57954542-57961940 | HUVEC | | SE_50199 | chr3:57959392-57961787 | Sigmoid_Colon | | SE_52474 | chr3:57960340-57961327 | Small_Intestine | | SE_56605 | chr3:57959465-57961879 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr3 | 57960548 | 57960842 | | chr3 | 57960493 | 57961011 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH03I057966 | chr3 | 57952462 | 57961827 |
|
Enhancer Sequence | GACGGGAGAA TATGCTTGAA CCTGGAAGGC AGAGGTTGCA GTGAGCCGAG ATCACGCCAC 60
TCCACTCCAG CCTGGGCGAC AGAGCGAGAC TCCGGGTCAA TAAAAAAAAA AAAGAAAAAA 120
AGAGATTCCC TCCCTGAGCT GACACCTTGC TGGCTAGTAG CATAGGTGGT ACCAGCTCTG 180
GCCTCCAGAC ATCCTCAGCC CTCAGCCATT TCCACTACAG AAAGCACCCA GACATCATCC 240
AAAGCCAACA CTCAGATGAT GCAAAAGTCA ATGCAGATAA CTCACAGGAA GGAAGGTCAT 300
CCTGAGGTCT GATGAGTCAG GGAAGGACAG AGACATTCCT CACATTTTCA CCAGCAGTTC 360
TGCTGATAGA GGTCTCATGT GGGTCTGGTG TTCCTCTAGG ATTGGGTGGA GCCGTTTAAA 420
CATGAGAAAC GGCTGTTACA ATAAATACAA TAAAAGATGG TCATGCTGAT TTAGCAGTAA 480
GTGAGTGGAG CCAGAAAACC AAATTGGGGG TGAGGGTGAG GAAGAGGAAT GGGGCTTTGC 540
AGTCGAATCC AGCAGCAAAT AGGCCCATGC CTGGAAGGAA GTTAGTCTGA GGCCACAACA 600
AATCAGGCAG GGAGGTACAT TGCTGGTAGC TACACATATT GGTGTCATCT TCCTAGAGGA 660
CATGTGGGTA GTTTATAAGA GAAACCATTA AGGGGTCATA AAGGTAAGGC TGGGTCGGGC 720
GTGGTGGCTC ACGCCTATAA TCCCAGCACT TTGGGAGGTC GAGATGGGAG GATCGCTTGA 780
GCCCAGGAGT TTGAGACCAG CCTGGGCAAA ATGGCGAGAC TGTCTCTACC AAAATGAAAA 840
CATGCCTGTA GTCCCAGCTA 860
|
