| Tag | Content |
|---|
EnhancerAtlas ID | HS177-15142 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr3:52059350-52059950 |
Target genes | | Number: 25 | Name | Ensembl ID |
|
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| KLF4 | MA0039.3 | chr3:52059884-52059895 | CCACACCCTGC | + | 6.62 | | TCFL5 | MA0632.2 | chr3:52059630-52059640 | GTGCGCGTGA | - | 6.02 | | Zfx | MA0146.2 | chr3:52059461-52059475 | CCCGCCTCGGCCTG | + | 6.62 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_03944 | chr3:52059428-52060577 | Brain_Anterior_Caudate | | SE_04877 | chr3:52057242-52060855 | Brain_Cingulate_Gyrus | | SE_05826 | chr3:52047782-52060856 | Brain_Hippocampus_Middle | | SE_07808 | chr3:52058858-52060826 | Brain_Inferior_Temporal_Lobe | | SE_40681 | chr3:52048877-52060881 | Left_Ventricle | | SE_42189 | chr3:52050410-52060787 | Lung | | SE_48233 | chr3:52048478-52060820 | Psoas_Muscle | | SE_48624 | chr3:52050125-52060821 | Right_Atrium | | SE_49568 | chr3:52059025-52060553 | Right_Ventricle |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH03I052024 | chr3 | 52058859 | 52060826 |
|
Enhancer Sequence | GCAGCTGTTG GACAGTCCTT CTTGAGTGAG GTGCTTCTCC CCTCAAACTC CCAGCCAAGG 60
TTTTCTGCAT CCTAACCTCT ACCCACCCTC TGCCCCCAAC TTTTCATCTT TCCCGCCTCG 120
GCCTGAATGG AGTCTGGGGT CAGGGTGGAC TCCGTGGGTA GGGCCCTGGG CTTCTGCAGG 180
CTGCATAACA CTAGCTGCCC ATCTGATCTG TCCTGGGAAT ATGGCCCCAG ATGGCTGAGG 240
TGGGTTCCAG GCTAGAGCCT CCCCAGCTGG CTGCCAACAT GTGCGCGTGA GGAGAGGCAC 300
ACAGTCTGTT TCCTGGATGC CTGGCCTGTC AGCCTGCACA TCCTGCCTGG ACTGACCAGG 360
TTGAGGACAC AAGCCAGCGG GTAGAGGCAG GGCCAGACAA TTTCATGGGC ATTGACAGAC 420
AAGTGGAGCA CCCCATTAGT GACCTCCCTC ACTCAGCACA CATCTGTTCG GCCCCTGCCA 480
CGTGTCTGGC CCTGTGATGG ACACTAGGCC CTCAGAAATG AATTAGCCAT GAACCCACAC 540
CCTGCCCTCC TAGACCAGGA GCCCTGGGTC TAGACAGGCA TGGGGAGACC ACAGGGAACA 600
|
