EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-15114

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr3:49203300-49203690

Target genes

Number: 23
Name	Ensembl ID

RP13	ENSG00000235236
P4HTM	ENSG00000178467
WDR6	ENSG00000178252
MIR425	ENSG00000199032
NDUFAF3	ENSG00000178057
DALRD3	ENSG00000178149
IMPDH2	ENSG00000178035
AC135506.1	ENSG00000241461
QRICH1	ENSG00000198218
QARS	ENSG00000172053
USP19	ENSG00000172046
LAMB2	ENSG00000172037
CCDC71	ENSG00000177352
KLHDC8B	ENSG00000185909
CCDC36	ENSG00000173421
RP11	ENSG00000236980
C3orf62	ENSG00000188315
USP4	ENSG00000114316
GPX1	ENSG00000233276
RHOA	ENSG00000235908
TCTA	ENSG00000145022
AMT	ENSG00000145020
NICN1	ENSG00000235261

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr3:49203561-49203581	GGGTGGGGGTGGGGTGGGGG	-	6.74
RREB1	MA0073.1	chr3:49203560-49203580	GGGGTGGGGGTGGGGTGGGG	-	8.54

Enhancer Sequence

ACAGAGGCTC CTGCCCGGCC TCCGACTTCC CTTCACACGT GCCCCCGGGG AAGGCAGGAG 60
AAGTTGACGG AAGATAGGGC GTGAGAGAGG CGCCACACAG GCAGACCGGG GGAGGGGGCA 120
GATCGGGGCC CTCAGGCTGG GAATGCACGT CCTTAGGGCC CAAGCCGTGA GGCGGGGGTC 180
ACTGAGGCAG CGAAATGTAC AGGGTGAACG GTGCTAGCCC TACCGGGACC GCACAGCCCC 240
AGGGTGGGGT CGCTGGGCGC GGGGTGGGGG TGGGGTGGGG GGTCTCGGCC AGGCCGGCGG 300
AGGACGCGGG TCCGGGAAGA GTTGGCCGCT TGCCCGTCCG CCCTGCCGCC TCGCGGGCCG 360
CCCCTCCGCG GCGCGGCTAG GCCCGCGGCT 390