EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS177-15019 
Organism
Homo sapiens 
Tissue/cell
SK-N-SH_RA 
Coordinate
chr3:39192250-39193450 
TF binding sites/motifs
Number: 7             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
KLF16MA0741.1chr3:39192946-39192957GGGGGCGGGGC-6.02
KLF5MA0599.1chr3:39192947-39192957GGGGCGGGGC-6.02
MITFMA0620.2chr3:39193137-39193155TGGGGTCACATGACCCCT+6.08
MITFMA0620.2chr3:39193137-39193155TGGGGTCACATGACCCCT-6.08
SP1MA0079.4chr3:39192945-39192960TGGGGGCGGGGCTTG-6.76
SP2MA0516.2chr3:39192944-39192961GTGGGGGCGGGGCTTGA-6.85
SP4MA0685.1chr3:39192943-39192960AGTGGGGGCGGGGCTTG-7.21
Number of super-enhancer constituents: 45             
IDCoordinateTissue/cell
SE_00534chr3:39187077-39197631Adipose_Nuclei
SE_01089chr3:39190910-39196378Adrenal_Gland
SE_01899chr3:39187322-39196765Aorta
SE_02320chr3:39187493-39196198Astrocytes
SE_03014chr3:39191639-39195554Bladder
SE_04302chr3:39187580-39195097Brain_Anterior_Caudate
SE_05565chr3:39187535-39197818Brain_Cingulate_Gyrus
SE_06185chr3:39187142-39197857Brain_Hippocampus_Middle
SE_07580chr3:39187284-39196241Brain_Hippocampus_Middle_150
SE_08206chr3:39186982-39195061Brain_Inferior_Temporal_Lobe
SE_10149chr3:39186779-39195996CD14
SE_14356chr3:39191913-39195475CD34_Primary_RO01549
SE_17247chr3:39191770-39195864CD4p_CD225int_CD127p_Tmem
SE_18872chr3:39187113-39196177CD4p_CD25-_Il17-_PMAstim_Th
SE_19278chr3:39187136-39196336CD4p_CD25-_Il17p_PMAstim_Th17
SE_23377chr3:39191729-39195137Colon_Crypt_1
SE_23920chr3:39191749-39192426Colon_Crypt_2
SE_23920chr3:39192453-39196184Colon_Crypt_2
SE_24797chr3:39192417-39196622Colon_Crypt_3
SE_26868chr3:39187409-39196585Esophagus
SE_31506chr3:39191681-39197888Gastric
SE_35162chr3:39191478-39196400HeLa
SE_36770chr3:39191536-39195220HMEC
SE_37186chr3:39186804-39195747HSMMtube
SE_38092chr3:39187171-39195921HUVEC
SE_40501chr3:39190863-39195162K562
SE_40691chr3:39187355-39196752Left_Ventricle
SE_41653chr3:39190970-39195221LNCaP
SE_42157chr3:39187438-39196764Lung
SE_45141chr3:39191813-39195573NHLF
SE_46489chr3:39187606-39195364Osteoblasts
SE_47666chr3:39191609-39195191Pancreas
SE_48424chr3:39187382-39196729Psoas_Muscle
SE_49175chr3:39190859-39196443Right_Atrium
SE_49729chr3:39191817-39195547Right_Ventricle
SE_50193chr3:39187407-39196676Sigmoid_Colon
SE_51558chr3:39187056-39196628Skeletal_Muscle
SE_52456chr3:39187337-39197976Small_Intestine
SE_53827chr3:39187396-39196382Spleen
SE_55403chr3:39191882-39195540Thymus
SE_58072chr3:39192864-39193364VACO_9m
SE_60385chr3:39186669-39195737Ly4
SE_62971chr3:39182508-39196204Tonsil
SE_63844chr3:39191499-39195289HSMM
SE_65440chr3:39187335-39197020Pancreatic_islets
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr33919238139192719
Enhancer Sequence
TAAGGTGAGG AGGTTATGAC CTCCAAGCCT ACAGACAGGG AAACAGAGAC ACAGGGAAGC 60
TACGGTCATG CTGCAGGTTC TAGTGATGAA CAATCCCCTC CAAATCTGCA GAGCGGGAAT 120
GAAATGAGAA ATTACCTCCT CCCTGATACT CCTCTGGAGA GGCGGGGGAA GTGCCCCTGG 180
TTCTCATGTT CCTCTGTTCC ACCTCGGAAT CCAGAGGCTA AGAGGCAGAG GCAGGAGATG 240
AAACAAAAAG ACTGAGCCAG AGACAAGGAG AGGCCAAGAG GGAATGAAAC ATAGTGAGAA 300
TCTAAGAAAA GTGTCAGACA GTGAGTCAGA GGTGGGGGGA GGGGCCCTCA GCAGCTACCC 360
AGGAATCAAG ATCCTGACCA TGGCAGTGTT CCCAGGGTGA GCACAGCCCC CTCCCTAGGG 420
TCCTGGAGGA AGGAAAAGCA GTTCCCAGGA GCTGGCTCAG ACAGAAATAC CACACCGCCG 480
AGGAACCCCA GAGACAGGCC CTGAATCTGA GAGCCAGGCT TCTTCTGGGA TCTGAGCCCT 540
GACAATCAGG CAGCCCTCCT GCCACCACAC ACAGGCACTG ACAACCCCCC ACTCAACTGG 600
CCACAGTTAT CCACACGCTC AGGTCACACT GTGCAAATCC AGGAAAGGCC ACCTCACCCC 660
TGGGCACCAA GTAACCAAAG GCTGTTTTTG AGAAGTGGGG GCGGGGCTTG AAAACGTCAC 720
AGCAACTCCT CTGTCCACCT CAGCAGTCCT ACCAGTGCCC CAGGCCTCAA CCCAAGCCAG 780
TCTTAGGGAG GGGGCACCTT TAGCTGCCTC CATCCCCCTT CAGGAATCTG AAGAATGTGT 840
CCTTTAACCT CAGAGCCCCA GGCCTTGGCC AGTCCCCCCA AAACACTTGG GGTCACATGA 900
CCCCTGTCCC TCAGGAACTT CCTGGGAGAA GGGGAGGGCA CCTCCCAGCA CCTCTAGCCC 960
CCACTGAAAA ACCAGCCTGG GTGGCCCTGA GAGGGCAGAC CGAAAGCCTT GGCACCTCCT 1020
CCCCAACCAT CCCTCTGAAG GAGAGCTGGG GGAGGGGACG GCTCCTCGGC TTTGGCCTCC 1080
AGGACCTGGC ACTGGATAGG TGCCAAATGT TTGCTGGCTA CATGAGGCAC TTGTTCCTGC 1140
AGAAGGGAAA CTGCACCTGA CAATGACTGC TTCCTCCACC TAAGTGGGGC CTTCTTCCCT 1200