Tag | Content |
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EnhancerAtlas ID | HS177-15018 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr3:39188400-39189050 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RREB1 | MA0073.1 | chr3:39188530-39188550 | ACACAAAACACACACACACA | + | 6.71 | ZNF263 | MA0528.1 | chr3:39188785-39188806 | TCTGCTTCCTCCTCCTCCTCC | - | 6.43 | ZNF263 | MA0528.1 | chr3:39188788-39188809 | GCTTCCTCCTCCTCCTCCTCC | - | 9.27 |
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| Number of super-enhancer constituents: 43 | ID | Coordinate | Tissue/cell |
SE_00534 | chr3:39187077-39197631 | Adipose_Nuclei | SE_01089 | chr3:39187508-39190600 | Adrenal_Gland | SE_01899 | chr3:39187322-39196765 | Aorta | SE_02320 | chr3:39187493-39196198 | Astrocytes | SE_03014 | chr3:39187741-39190548 | Bladder | SE_04302 | chr3:39187580-39195097 | Brain_Anterior_Caudate | SE_05565 | chr3:39187535-39197818 | Brain_Cingulate_Gyrus | SE_06185 | chr3:39187142-39197857 | Brain_Hippocampus_Middle | SE_07580 | chr3:39187284-39196241 | Brain_Hippocampus_Middle_150 | SE_08206 | chr3:39186982-39195061 | Brain_Inferior_Temporal_Lobe | SE_10149 | chr3:39186779-39195996 | CD14 | SE_14356 | chr3:39187118-39191048 | CD34_Primary_RO01549 | SE_17247 | chr3:39188355-39190934 | CD4p_CD225int_CD127p_Tmem | SE_18872 | chr3:39187113-39196177 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19278 | chr3:39187136-39196336 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_23377 | chr3:39187613-39190524 | Colon_Crypt_1 | SE_23920 | chr3:39187798-39190475 | Colon_Crypt_2 | SE_24797 | chr3:39187657-39190081 | Colon_Crypt_3 | SE_26868 | chr3:39187409-39196585 | Esophagus | SE_31506 | chr3:39187425-39190678 | Gastric | SE_35162 | chr3:39188481-39190214 | HeLa | SE_36770 | chr3:39187856-39190350 | HMEC | SE_37186 | chr3:39186804-39195747 | HSMMtube | SE_38092 | chr3:39187171-39195921 | HUVEC | SE_40501 | chr3:39188054-39190602 | K562 | SE_40691 | chr3:39187355-39196752 | Left_Ventricle | SE_41653 | chr3:39187913-39190606 | LNCaP | SE_42157 | chr3:39187438-39196764 | Lung | SE_45141 | chr3:39187656-39190533 | NHLF | SE_46489 | chr3:39187606-39195364 | Osteoblasts | SE_47666 | chr3:39188511-39189839 | Pancreas | SE_48424 | chr3:39187382-39196729 | Psoas_Muscle | SE_49175 | chr3:39187672-39190712 | Right_Atrium | SE_50193 | chr3:39187407-39196676 | Sigmoid_Colon | SE_51558 | chr3:39187056-39196628 | Skeletal_Muscle | SE_52456 | chr3:39187337-39197976 | Small_Intestine | SE_53827 | chr3:39187396-39196382 | Spleen | SE_55403 | chr3:39187983-39191324 | Thymus | SE_58072 | chr3:39188449-39189462 | VACO_9m | SE_60385 | chr3:39186669-39195737 | Ly4 | SE_62971 | chr3:39182508-39196204 | Tonsil | SE_63844 | chr3:39187601-39190894 | HSMM | SE_65440 | chr3:39187335-39197020 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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Enhancer Sequence | AGCACCTCCC TCCCTCCAAA CTAATGTGCA AATCCACAGC CTGATGCTTC AAACTCCCAC 60 CTCTGCCCAA AGCCTTCCCA GGCACCAGGC ACCTTCCCCA CTACCTCCTA CAACACACAC 120 TTACATACAT ACACAAAACA CACACACACA CACACACACA TGCATCCACA CCAGCAGGGG 180 AAGGAGGCAG ACAGACCAAC AGATGGACTG ACAGACCTCA GCCTGGTCTC ACTCATTCCC 240 CGACAGGAAT CCTGGCGCTG ACTCACAGGC TGGGTGATTC ACACAGCTTG CATCTGTGTG 300 CCTGTGTGTG TGTGTGTGTG TGTGTGTATG TGTGTGTGTG TACGCCCTAC AGCCCGCACA 360 GCCCGCACGG CCCTGGTATG GTGGCTCTGC TTCCTCCTCC TCCTCCTCCA GCACATCCAA 420 ACAGGCACGC CACTCTGCAC ACAGGCAGGG CTGCGGGCCC TTGCTCCAGG CTAGCCAGGC 480 ACTCTGGGGA ACAGGCTGGC TTTGACGTTG GCCTCCATTC CTAGACGGAG TAGTTTCTGA 540 GCCCTTCCCC TCCCGGTGTG GGAGCTTCTC AGACTTTCCC TTAGAAACCC CCGCTCCACT 600 GTCAAGAAGT CTCCTGCCTC CAGGCCTGTG TGACCACAGC CACTAAGGCT 650
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