| Tag | Content |
|---|
EnhancerAtlas ID | HS177-13916 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr20:48041070-48041370 |
Target genes | | Number: 10 | Name | Ensembl ID |
|
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RFX1 | MA0509.2 | chr20:48041307-48041323 | GGTCGCCATGACAACG | - | 6.79 | | RFX1 | MA0509.2 | chr20:48041307-48041323 | GGTCGCCATGACAACG | + | 6.8 | | RFX2 | MA0600.2 | chr20:48041307-48041323 | GGTCGCCATGACAACG | - | 6.58 | | RFX2 | MA0600.2 | chr20:48041307-48041323 | GGTCGCCATGACAACG | + | 6.59 | | RFX5 | MA0510.2 | chr20:48041307-48041323 | GGTCGCCATGACAACG | + | 6 | | RFX5 | MA0510.2 | chr20:48041307-48041323 | GGTCGCCATGACAACG | - | 6 | | RREB1 | MA0073.1 | chr20:48041134-48041154 | CCCAAACCCACACACCCCCA | + | 6.14 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_03667 | chr20:48040168-48041220 | Brain_Angular_Gyrus | | SE_03667 | chr20:48041285-48041809 | Brain_Angular_Gyrus | | SE_07800 | chr20:48034795-48042343 | Brain_Inferior_Temporal_Lobe |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH20I049423 | chr20 | 48040169 | 48041220 | | GH20I049424 | chr20 | 48041286 | 48041809 |
|
Enhancer Sequence | AACCGCTGGA AATGACAGGA GCTGAAGGCC CCAAAGGTAC ACAGAAGGTC ATGCCTCTCA 60
GCTTCCCAAA CCCACACACC CCCAGATGCT GCCTGTCCCT ACATCCGGCT GCTGGGGCTG 120
AGCAGCCAAT TTGGGACGAC CGTGATATAT TTAACGGTGA GTCATGCTCT CCCCCAGCAA 180
TCAGCAGTGG CAGGCTCGGG AGGATGCAGG GAGCATCTCT GGAAATCCGT GCCTGAGGGT 240
CGCCATGACA ACGCCATCTG AGTCGCTTGC CAGCAGCTGG GATGCCAGTG CCTGAACCAA 300
|
