| Tag | Content |
|---|
EnhancerAtlas ID | HS177-13818 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr20:39686680-39687460 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CDX2 | MA0465.1 | chr20:39687250-39687261 | TTTTATGGCCT | - | 6.02 | | LBX2 | MA0699.1 | chr20:39687122-39687132 | GCTAATTGGC | - | 6.02 | | POU4F2 | MA0683.1 | chr20:39686889-39686905 | ATGCATTATTAATTGA | + | 6.18 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_15352 | chr20:39686000-39687860 | CD4_Memory_Primary_7pool | | SE_18955 | chr20:39686018-39688002 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_59468 | chr20:39673627-39707499 | Ly3 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I041057 | chr20 | 39686267 | 39687786 |
|
Enhancer Sequence | TGCATGGAAG ATTGAGTTCA AATCCTACTT CTGACACCAT ATGATATTAT TTTTCCCATC 60
TCTGTAGGAT GGGAATTTCT TACAGTTAGT ACTACGGTCA TGCAGATTTC TATTTTCCCA 120
GGGCCTGACA CAGAATAGAT GCTCAGCAGA TTATGACACA TGTGGCTTCT TTTGCTGTGA 180
GCCAGTCATG GGATGAAGAC ACATTGCCTA TGCATTATTA ATTGATTGCT ATAAAACATG 240
TTGCCTCAAA ATATAATAGC TTAAAACAAC AGACACTTAT TTTCTCATGT AGTTCCTGTG 300
AGTCAGGAAT CCAGACATAG TTTATCTGGG TGGCTTTGGC TTACCATCTG TAGATTGCAG 360
TCAGTATGTC AGCCAGGGCT GCAGTCATTT GAAAACTTAA TTTAGGCTAG AAGGTCCACT 420
TCCAGGATGG CTCATTCACA TGGCTAATTG GCAGGAAGCT TAAGTTTCTT ACTACATGGG 480
CCTTTCCAGA GGGCTTCTGA GTGAGTACAT GACAGTGTGT CACTGGCCTC CCCCAGAGCA 540
AGGAGAGAGC AGGAAGGAAG ATCTAATACC TTTTATGGCC TAGTGTCGGA AGTTGCCCCC 600
TCACAATTCC ACTTCATCTT GTTTGTTAGG AGTGAGTCAC AGTGTCCAGC CCACACTCAA 660
GGGGAGGGGA ATTAGGCTAT ACCTCTTGAA AAGCGGAGTA ACAAACAATC TTATAGTCAA 720
GATTGTGTTT GTGTAAGGTT AGAATAGAGG GTCCGGAAAT AGACCTATAA TTATATGACC 780
|
