Tag | Content |
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EnhancerAtlas ID | HS177-13490 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr20:290050-291500 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr20:290776-290794 | CCTTCTCCCCTTCCTTCC | - | 6.65 | EWSR1-FLI1 | MA0149.1 | chr20:290788-290806 | CCTTCCTTCCCTCCCTCT | - | 6.94 | EWSR1-FLI1 | MA0149.1 | chr20:290780-290798 | CTCCCCTTCCTTCCTTCC | - | 7.43 | EWSR1-FLI1 | MA0149.1 | chr20:290784-290802 | CCTTCCTTCCTTCCCTCC | - | 9.47 | KLF16 | MA0741.1 | chr20:291228-291239 | GCCCCGCCCCC | + | 6.02 | KLF5 | MA0599.1 | chr20:291228-291238 | GCCCCGCCCC | + | 6.02 | RFX1 | MA0509.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | + | 6.63 | RFX1 | MA0509.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | - | 6.66 | RFX2 | MA0600.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | + | 7.13 | RFX2 | MA0600.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | - | 7.14 | RFX5 | MA0510.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | - | 7.08 | RFX5 | MA0510.2 | chr20:291135-291151 | CGTTGCCATAGAAACC | + | 7.21 | SP1 | MA0079.4 | chr20:291225-291240 | GAGGCCCCGCCCCCC | + | 6.52 | SP3 | MA0746.2 | chr20:291227-291240 | GGCCCCGCCCCCC | + | 6.11 | SP4 | MA0685.1 | chr20:291225-291242 | GAGGCCCCGCCCCCCAG | + | 6.04 | ZNF263 | MA0528.1 | chr20:290776-290797 | CCTTCTCCCCTTCCTTCCTTC | - | 6.6 | ZNF263 | MA0528.1 | chr20:290766-290787 | CCCTCCCTCCCCTTCTCCCCT | - | 6.81 | ZNF263 | MA0528.1 | chr20:290784-290805 | CCTTCCTTCCTTCCCTCCCTC | - | 7.27 | ZNF263 | MA0528.1 | chr20:290772-290793 | CTCCCCTTCTCCCCTTCCTTC | - | 7.35 | ZNF263 | MA0528.1 | chr20:290793-290814 | CTTCCCTCCCTCTCTTCCTCC | - | 7.59 |
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| Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
SE_04571 | chr20:289111-292182 | Brain_Anterior_Caudate | SE_05672 | chr20:288550-292373 | Brain_Cingulate_Gyrus | SE_06604 | chr20:288859-292008 | Brain_Hippocampus_Middle | SE_07456 | chr20:288751-292193 | Brain_Hippocampus_Middle_150 | SE_08506 | chr20:288447-292351 | Brain_Inferior_Temporal_Lobe | SE_29860 | chr20:289076-292911 | Fetal_Muscle | SE_54219 | chr20:289529-291501 | Spleen | SE_64903 | chr20:288518-291179 | NHEK |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I000307 | chr20 | 288611 | 292808 |
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Enhancer Sequence | TTCTGAGCCC CACAAATGCC CATTTGGTTC TGTCATTTCT TTGCATAGAC AAGCTACATA 60 ACCTCTCTGA ACTTCAGTTT CCTGAGCAGG AAAATGGGTC TATGGTAATA ACTACATTAT 120 CAGGGCTGGT GAGAAAATGA AATAAAATAA TCCATGTCAA GGGCTTGAGA AGAATGCCCT 180 CTGGCTGTCG TCTCCTATGA CTTCCTGTAT GATCTCCAAA CTGCTCTCTT TGCAGGGTTT 240 CAACACGGCT GCTCCCTCCT GCCTCCTTAC CCACAGCCAA TAACCTCCCC ATTCTCTCCA 300 CCTAGTCAAA TCCCACCGTC TTCAATTGTG ATAATAGCTG GTTGATTGCA CGTTTACTAC 360 GTTTCAGGCA TTGTATTAAG AACTTTCCAT GCATTAACTC AGTTCTGACA CCAACTCGAT 420 GAAGCAGGCA CTGTTTATTA TTCCCCAAAC ACAAAGACAC AGGGATCTGG AGACTGGAAG 480 CACTGGCGGC TGCAAGTGGC AGGGCTGGCG GGGTGTGAAG CCGGAGAGGA GTCTTTCTGC 540 AGTCAGGCCT CCCAAATCCC GGGATGGAAT CAAGGAGCCT TTGGCTGTCC CACCCCTCCT 600 CCTCCAAGCC CCCAAATCCA AGTCTGTTAT ATCCCGTCAG CTCTGCGGGC CTGCCTGTGA 660 CTTTCAGCCC AAGGGGGCGG GCACTTCGTG TCACGCCACG TTGTCCACAT CATCGACCCT 720 CCCTCCCCTT CTCCCCTTCC TTCCTTCCCT CCCTCTCTTC CTCCCATTGA GTGCCAGTTC 780 TGTGCCAAGC TTTGCTGTTC AAAATGTTAC GAGTGGAGAA GTCAGGGAAG GATGGAATTA 840 TAGGTGTTTC TTCTTCATAC CTTTCTGTTT GGCTGATTTT TTTTCAAATG AGCACGCAGG 900 CCCGGTTCCT CAAACCCACT TCCAATGTGG CATTGCTGGG TTGGTTTGGT CCAAGGAAAG 960 CCCTGTCTCC TTAACTCCCA GCCCCCACGC CTCCTCCGCC GGCCCCCAAA TCCAGGCCGC 1020 CCTGCCCCCT CCGGAAAGGG GAGTTGGGGG CGAGCGCCGA AATCTGAGTG GCTCTTTCAA 1080 GCCTCCGTTG CCATAGAAAC CGGCCGCACA GGCCGATGCT GTCCATTACA CCATCCTCTA 1140 GCCTCGCAGC CAATGGACTC CGAGCTCCAT CGCCAGAGGC CCCGCCCCCC AGCTCTGGGG 1200 AGTCCACCAA TCAGCAGGTC CCGTGACTTA GAGCCCTGCC CTCGGCCCAG GGACACCACC 1260 AATGCGCTTC GACCCTGCCC TCCTTCTCTT CGGTGTAACA AGAAGACTCG ATATTTTTTT 1320 TTTTTTTTTT AGGAATTCTC CAGATCAGAA GGAATTGGCA GTAAGGCCTC TGTCAGCTGC 1380 ACCCTGAATA ATCTTTGGCT GCTATTTTAT TTAAGGAGAG CAAAACTGTT TCAATTACGC 1440 AACAATATAT 1450
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