EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-13439

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr2:238491130-238491490

Target genes

Number: 8
Name	Ensembl ID

COPS8	ENSG00000198612
COL6A3	ENSG00000163359
AC112721.1	ENSG00000222022
AC112721.2	ENSG00000222032
MLPH	ENSG00000115648
RBM44	ENSG00000177483
RAMP1	ENSG00000132329
UBE2F	ENSG00000184182

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_01566	chr2:238490247-238491613	Aorta
SE_29379	chr2:238490457-238491259	Fetal_Intestine_Large
SE_32293	chr2:238490246-238491523	Gastric
SE_40633	chr2:238490020-238491674	Left_Ventricle
SE_41966	chr2:238490345-238491423	LNCaP
SE_42111	chr2:238490176-238491665	Lung
SE_68971	chr2:238490333-238491560	H9

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH02I237581

chr2

238489981

238491439

Enhancer Sequence

GCATGCCTGT GGCCATCCAT CCTGTCCCTC CCTCGGGGAT CCTGCAGCCA AGCACTGGGC 60
GTGCTGCCTC CTGCATTTCC AGGCCGCCTG TGAGGACAGC ACTCCCATTC TCCTCTGAGG 120
CTCTGCTCCT GGCCTACCCT CTCCCCTGGA CAGGAGCCCA GTGTTCTTGA TAAAAGCTGA 180
AGCCACACGT GACAAAAGAA GCAGGAGTGT CTGCTCTCAA AGGGTTTTTG TGCAACACAG 240
ATCACTCTTC CCCCAAAGCA CGTAAGTTAA AGGAGTGAGC ACATCCCATC TCCTCATCCT 300
AAAAGTGGCA ATATCCACAT TTATAATATG TGATCATGTA ATTATTATAA TGAGGATTAA 360